Gene : Cagra.0003s0028 C. grandiflora v1.1
Defline:  (1 of 2) 1.2.1.41//2.7.2.11//PROLINE-MULTI - Glutamate-5-semialdehyde dehydrogenase / Glutamyl-gamma-semialdehyde dehydrogenase // Glutamate 5-kinase / Gamma-glutamyl kinase Genomic Order:  28
Name:  ? Cagra.0003s0028 Secondary Identifier:  ? PAC:28913296
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ARGININE-SYN4-PWY Capsella grandiflora pathologic  
Cgrandiflora CITRULBIO-PWY Capsella grandiflora pathologic  
Cgrandiflora PROSYN-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-3341 Capsella grandiflora pathologic  
Cgrandiflora PWY-6922 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0003s0028 0.5kb upstream 0.5kb upstream 5115 true Scaffold3: 89567-94681 Capsella grandiflora
Cagra.0003s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold3: 89567-90066 Capsella grandiflora
Cagra.0003s0028 0.5kb downstream 0.5kb downstream 5115 true Scaffold3: 90067-95181 Capsella grandiflora
Cagra.0003s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold3: 94682-95181 Capsella grandiflora
Cagra.0003s0028 1.0kb upstream 1.0kb upstream 5615 true Scaffold3: 89067-94681 Capsella grandiflora
Cagra.0003s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold3: 89067-90066 Capsella grandiflora
Cagra.0003s0028 1.0kb downstream 1.0kb downstream 5615 true Scaffold3: 90067-95681 Capsella grandiflora
Cagra.0003s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold3: 94682-95681 Capsella grandiflora
Cagra.0003s0028 2.0kb upstream 2.0kb upstream 6615 true Scaffold3: 88067-94681 Capsella grandiflora
Cagra.0003s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold3: 88067-90066 Capsella grandiflora
Cagra.0003s0028 2.0kb downstream 2.0kb downstream 6615 true Scaffold3: 90067-96681 Capsella grandiflora
Cagra.0003s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold3: 94682-96681 Capsella grandiflora
Cagra.0003s0028 5.0kb upstream 5.0kb upstream 9615 true Scaffold3: 85067-94681 Capsella grandiflora
Cagra.0003s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold3: 85067-90066 Capsella grandiflora
Cagra.0003s0028 5.0kb downstream 5.0kb downstream 9615 true Scaffold3: 90067-99681 Capsella grandiflora
Cagra.0003s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold3: 94682-99681 Capsella grandiflora
Cagra.0003s0028 10.0kb upstream 10.0kb upstream 14615 true Scaffold3: 80067-94681 Capsella grandiflora
Cagra.0003s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold3: 80067-90066 Capsella grandiflora
Cagra.0003s0028 10.0kb downstream 10.0kb downstream 14615 true Scaffold3: 90067-104681 Capsella grandiflora
Cagra.0003s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold3: 94682-104681 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364069 5261 Brassicaceae View MSA
123836624 5264 Brassicales-Malvales View MSA
124336591 5266 SBM View MSA
124242144 5268 Malvidae View MSA
124064973 5270 Rosid View MSA
123744591 5271 Pentapetalae View MSA
122786608 5272 Eudicot View MSA
122047433 5273 Angiosperm View MSA
121343806 5274 Embryophyte View MSA
123427959 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain