Gene : Cagra.0173s0005 C. grandiflora v1.1
Defline:  (1 of 7) 1.8.4.12 - Peptide-methionine (R)-S-oxide reductase / Selenoprotein R Genomic Order:  5
Name:  ? Cagra.0173s0005 Secondary Identifier:  ? PAC:28913265
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0173s0005 0.5kb upstream 0.5kb upstream 2118 true Scaffold173: 23559-25676 Capsella grandiflora
Cagra.0173s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold173: 25177-25676 Capsella grandiflora
Cagra.0173s0005 0.5kb downstream 0.5kb downstream 2118 true Scaffold173: 23059-25176 Capsella grandiflora
Cagra.0173s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold173: 23059-23558 Capsella grandiflora
Cagra.0173s0005 1.0kb upstream 1.0kb upstream 2618 true Scaffold173: 23559-26176 Capsella grandiflora
Cagra.0173s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold173: 25177-26176 Capsella grandiflora
Cagra.0173s0005 1.0kb downstream 1.0kb downstream 2618 true Scaffold173: 22559-25176 Capsella grandiflora
Cagra.0173s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold173: 22559-23558 Capsella grandiflora
Cagra.0173s0005 2.0kb upstream 2.0kb upstream 3618 true Scaffold173: 23559-27176 Capsella grandiflora
Cagra.0173s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold173: 25177-27176 Capsella grandiflora
Cagra.0173s0005 2.0kb downstream 2.0kb downstream 3618 true Scaffold173: 21559-25176 Capsella grandiflora
Cagra.0173s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold173: 21559-23558 Capsella grandiflora
Cagra.0173s0005 5.0kb upstream 5.0kb upstream 6618 true Scaffold173: 23559-30176 Capsella grandiflora
Cagra.0173s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold173: 25177-30176 Capsella grandiflora
Cagra.0173s0005 5.0kb downstream 5.0kb downstream 6618 true Scaffold173: 18559-25176 Capsella grandiflora
Cagra.0173s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold173: 18559-23558 Capsella grandiflora
Cagra.0173s0005 10.0kb upstream 10.0kb upstream 11618 true Scaffold173: 23559-35176 Capsella grandiflora
Cagra.0173s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold173: 25177-35176 Capsella grandiflora
Cagra.0173s0005 10.0kb downstream 10.0kb downstream 11618 true Scaffold173: 13559-25176 Capsella grandiflora
Cagra.0173s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold173: 13559-23558 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361196 5261 Brassicaceae View MSA
123838722 5264 Brassicales-Malvales View MSA
124351503 5266 SBM View MSA
124245203 5268 Malvidae View MSA
124072451 5270 Rosid View MSA
123748657 5271 Pentapetalae View MSA
122793601 5272 Eudicot View MSA
122047974 5273 Angiosperm View MSA
121348855 5274 Embryophyte View MSA
123426618 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain