Gene : Cagra.0173s0012 C. grandiflora v1.1
Defline:  (1 of 1) PF00036//PF00069//PF13499 - EF hand (EF-hand_1) // Protein kinase domain (Pkinase) // EF-hand domain pair (EF-hand_7) Genomic Order:  12
Name:  ? Cagra.0173s0012 Secondary Identifier:  ? PAC:28913256
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0173s0012 0.5kb upstream 0.5kb upstream 2043 true Scaffold173: 58051-60093 Capsella grandiflora
Cagra.0173s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold173: 58051-58550 Capsella grandiflora
Cagra.0173s0012 0.5kb downstream 0.5kb downstream 2043 true Scaffold173: 58551-60593 Capsella grandiflora
Cagra.0173s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold173: 60094-60593 Capsella grandiflora
Cagra.0173s0012 1.0kb upstream 1.0kb upstream 2543 true Scaffold173: 57551-60093 Capsella grandiflora
Cagra.0173s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold173: 57551-58550 Capsella grandiflora
Cagra.0173s0012 1.0kb downstream 1.0kb downstream 2543 true Scaffold173: 58551-61093 Capsella grandiflora
Cagra.0173s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold173: 60094-61093 Capsella grandiflora
Cagra.0173s0012 2.0kb upstream 2.0kb upstream 3543 true Scaffold173: 56551-60093 Capsella grandiflora
Cagra.0173s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold173: 56551-58550 Capsella grandiflora
Cagra.0173s0012 2.0kb downstream 2.0kb downstream 3543 true Scaffold173: 58551-62093 Capsella grandiflora
Cagra.0173s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold173: 60094-62093 Capsella grandiflora
Cagra.0173s0012 5.0kb upstream 5.0kb upstream 6543 true Scaffold173: 53551-60093 Capsella grandiflora
Cagra.0173s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold173: 53551-58550 Capsella grandiflora
Cagra.0173s0012 5.0kb downstream 5.0kb downstream 6543 true Scaffold173: 58551-65093 Capsella grandiflora
Cagra.0173s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold173: 60094-65093 Capsella grandiflora
Cagra.0173s0012 10.0kb upstream 10.0kb upstream 11543 true Scaffold173: 48551-60093 Capsella grandiflora
Cagra.0173s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold173: 48551-58550 Capsella grandiflora
Cagra.0173s0012 10.0kb downstream 10.0kb downstream 11543 true Scaffold173: 58551-70093 Capsella grandiflora
Cagra.0173s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold173: 60094-70093 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332847 5261 Brassicaceae Singleton cluster - no MSA
123773871 5264 Brassicales-Malvales Singleton cluster - no MSA
124272335 5266 SBM Singleton cluster - no MSA
124252525 5268 Malvidae View MSA
124072267 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain