Gene : Cagra.0173s0013 C. grandiflora v1.1
Defline:  (1 of 8) PTHR24349:SF89 - CALCIUM-DEPENDENT PROTEIN KINASE 29 Genomic Order:  13
Name:  ? Cagra.0173s0013 Secondary Identifier:  ? PAC:28913271
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0173s0013 0.5kb upstream 0.5kb upstream 3815 true Scaffold173: 60400-64214 Capsella grandiflora
Cagra.0173s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold173: 60400-60899 Capsella grandiflora
Cagra.0173s0013 0.5kb downstream 0.5kb downstream 3815 true Scaffold173: 60900-64714 Capsella grandiflora
Cagra.0173s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold173: 64215-64714 Capsella grandiflora
Cagra.0173s0013 1.0kb upstream 1.0kb upstream 4315 true Scaffold173: 59900-64214 Capsella grandiflora
Cagra.0173s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold173: 59900-60899 Capsella grandiflora
Cagra.0173s0013 1.0kb downstream 1.0kb downstream 4315 true Scaffold173: 60900-65214 Capsella grandiflora
Cagra.0173s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold173: 64215-65214 Capsella grandiflora
Cagra.0173s0013 2.0kb upstream 2.0kb upstream 5315 true Scaffold173: 58900-64214 Capsella grandiflora
Cagra.0173s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold173: 58900-60899 Capsella grandiflora
Cagra.0173s0013 2.0kb downstream 2.0kb downstream 5315 true Scaffold173: 60900-66214 Capsella grandiflora
Cagra.0173s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold173: 64215-66214 Capsella grandiflora
Cagra.0173s0013 5.0kb upstream 5.0kb upstream 8315 true Scaffold173: 55900-64214 Capsella grandiflora
Cagra.0173s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold173: 55900-60899 Capsella grandiflora
Cagra.0173s0013 5.0kb downstream 5.0kb downstream 8315 true Scaffold173: 60900-69214 Capsella grandiflora
Cagra.0173s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold173: 64215-69214 Capsella grandiflora
Cagra.0173s0013 10.0kb upstream 10.0kb upstream 13315 true Scaffold173: 50900-64214 Capsella grandiflora
Cagra.0173s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold173: 50900-60899 Capsella grandiflora
Cagra.0173s0013 10.0kb downstream 10.0kb downstream 13315 true Scaffold173: 60900-74214 Capsella grandiflora
Cagra.0173s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold173: 64215-74214 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362497 5261 Brassicaceae View MSA
123833489 5264 Brassicales-Malvales View MSA
124343297 5266 SBM View MSA
124253288 5268 Malvidae View MSA
124069145 5270 Rosid View MSA
123751027 5271 Pentapetalae View MSA
122788788 5272 Eudicot View MSA
122048153 5273 Angiosperm View MSA
121310867 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain