Gene : Cagra.0179s0012 C. grandiflora v1.1
Defline:  (1 of 4) 2.4.1.14 - Sucrose-phosphate synthase / UDP-glucose-fructose-phosphate glucosyltransferase Genomic Order:  12
Name:  ? Cagra.0179s0012 Secondary Identifier:  ? PAC:28909727
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7238 Capsella grandiflora pathologic  
Cgrandiflora SUCSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0179s0012 0.5kb upstream 0.5kb upstream 6365 true Scaffold179: 39753-46117 Capsella grandiflora
Cagra.0179s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold179: 45618-46117 Capsella grandiflora
Cagra.0179s0012 0.5kb downstream 0.5kb downstream 6365 true Scaffold179: 39253-45617 Capsella grandiflora
Cagra.0179s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold179: 39253-39752 Capsella grandiflora
Cagra.0179s0012 1.0kb upstream 1.0kb upstream 6865 true Scaffold179: 39753-46617 Capsella grandiflora
Cagra.0179s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold179: 45618-46617 Capsella grandiflora
Cagra.0179s0012 1.0kb downstream 1.0kb downstream 6865 true Scaffold179: 38753-45617 Capsella grandiflora
Cagra.0179s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold179: 38753-39752 Capsella grandiflora
Cagra.0179s0012 2.0kb upstream 2.0kb upstream 7865 true Scaffold179: 39753-47617 Capsella grandiflora
Cagra.0179s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold179: 45618-47617 Capsella grandiflora
Cagra.0179s0012 2.0kb downstream 2.0kb downstream 7865 true Scaffold179: 37753-45617 Capsella grandiflora
Cagra.0179s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold179: 37753-39752 Capsella grandiflora
Cagra.0179s0012 5.0kb upstream 5.0kb upstream 10865 true Scaffold179: 39753-50617 Capsella grandiflora
Cagra.0179s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold179: 45618-50617 Capsella grandiflora
Cagra.0179s0012 5.0kb downstream 5.0kb downstream 10865 true Scaffold179: 34753-45617 Capsella grandiflora
Cagra.0179s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold179: 34753-39752 Capsella grandiflora
Cagra.0179s0012 10.0kb upstream 10.0kb upstream 15865 true Scaffold179: 39753-55617 Capsella grandiflora
Cagra.0179s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold179: 45618-55617 Capsella grandiflora
Cagra.0179s0012 10.0kb downstream 10.0kb downstream 15865 true Scaffold179: 29753-45617 Capsella grandiflora
Cagra.0179s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold179: 29753-39752 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365865 5261 Brassicaceae View MSA
123829547 5264 Brassicales-Malvales View MSA
124337284 5266 SBM View MSA
124251669 5268 Malvidae View MSA
124062800 5270 Rosid View MSA
123741512 5271 Pentapetalae View MSA
122790617 5272 Eudicot View MSA
122047849 5273 Angiosperm View MSA
121310805 5274 Embryophyte View MSA
123348202 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain