Gene : Cagra.0179s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR18804:SF7 - RIBOSOMAL PROTEIN Genomic Order:  3
Name:  ? Cagra.0179s0003 Secondary Identifier:  ? PAC:28909747
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0179s0003 0.5kb upstream 0.5kb upstream 1900 true Scaffold179: 7806-9705 Capsella grandiflora
Cagra.0179s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold179: 7806-8305 Capsella grandiflora
Cagra.0179s0003 0.5kb downstream 0.5kb downstream 1900 true Scaffold179: 8306-10205 Capsella grandiflora
Cagra.0179s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold179: 9706-10205 Capsella grandiflora
Cagra.0179s0003 1.0kb upstream 1.0kb upstream 2400 true Scaffold179: 7306-9705 Capsella grandiflora
Cagra.0179s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold179: 7306-8305 Capsella grandiflora
Cagra.0179s0003 1.0kb downstream 1.0kb downstream 2400 true Scaffold179: 8306-10705 Capsella grandiflora
Cagra.0179s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold179: 9706-10705 Capsella grandiflora
Cagra.0179s0003 2.0kb upstream 2.0kb upstream 3400 true Scaffold179: 6306-9705 Capsella grandiflora
Cagra.0179s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold179: 6306-8305 Capsella grandiflora
Cagra.0179s0003 2.0kb downstream 2.0kb downstream 3400 true Scaffold179: 8306-11705 Capsella grandiflora
Cagra.0179s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold179: 9706-11705 Capsella grandiflora
Cagra.0179s0003 5.0kb upstream 5.0kb upstream 6400 true Scaffold179: 3306-9705 Capsella grandiflora
Cagra.0179s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold179: 3306-8305 Capsella grandiflora
Cagra.0179s0003 5.0kb downstream 5.0kb downstream 6400 true Scaffold179: 8306-14705 Capsella grandiflora
Cagra.0179s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold179: 9706-14705 Capsella grandiflora
Cagra.0179s0003 10.0kb upstream 10.0kb upstream 9705 true Scaffold179: 1-9705 Capsella grandiflora
Cagra.0179s0003 10.0kb upstream 10.0kb upstream 8305 false Scaffold179: 1-8305 Capsella grandiflora
Cagra.0179s0003 10.0kb downstream 10.0kb downstream 11400 true Scaffold179: 8306-19705 Capsella grandiflora
Cagra.0179s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold179: 9706-19705 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369752 5261 Brassicaceae View MSA
123834390 5264 Brassicales-Malvales View MSA
124339828 5266 SBM View MSA
124244736 5268 Malvidae View MSA
124061900 5270 Rosid View MSA
123740045 5271 Pentapetalae View MSA
122796422 5272 Eudicot View MSA
122050877 5273 Angiosperm View MSA
121347060 5274 Embryophyte View MSA
123428353 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain