Gene : Cagra.0179s0042 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31087:SF3 - PROTEIN LURP-ONE-RELATED 16-RELATED Genomic Order:  42
Name:  ? Cagra.0179s0042 Secondary Identifier:  ? PAC:28909734
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0179s0042 0.5kb upstream 0.5kb upstream 1643 true Scaffold179: 169577-171219 Capsella grandiflora
Cagra.0179s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold179: 169577-170076 Capsella grandiflora
Cagra.0179s0042 0.5kb downstream 0.5kb downstream 1643 true Scaffold179: 170077-171719 Capsella grandiflora
Cagra.0179s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold179: 171220-171719 Capsella grandiflora
Cagra.0179s0042 1.0kb upstream 1.0kb upstream 2143 true Scaffold179: 169077-171219 Capsella grandiflora
Cagra.0179s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold179: 169077-170076 Capsella grandiflora
Cagra.0179s0042 1.0kb downstream 1.0kb downstream 2143 true Scaffold179: 170077-172219 Capsella grandiflora
Cagra.0179s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold179: 171220-172219 Capsella grandiflora
Cagra.0179s0042 2.0kb upstream 2.0kb upstream 3143 true Scaffold179: 168077-171219 Capsella grandiflora
Cagra.0179s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold179: 168077-170076 Capsella grandiflora
Cagra.0179s0042 2.0kb downstream 2.0kb downstream 3143 true Scaffold179: 170077-173219 Capsella grandiflora
Cagra.0179s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold179: 171220-173219 Capsella grandiflora
Cagra.0179s0042 5.0kb upstream 5.0kb upstream 6143 true Scaffold179: 165077-171219 Capsella grandiflora
Cagra.0179s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold179: 165077-170076 Capsella grandiflora
Cagra.0179s0042 5.0kb downstream 5.0kb downstream 6143 true Scaffold179: 170077-176219 Capsella grandiflora
Cagra.0179s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold179: 171220-176219 Capsella grandiflora
Cagra.0179s0042 10.0kb upstream 10.0kb upstream 11143 true Scaffold179: 160077-171219 Capsella grandiflora
Cagra.0179s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold179: 160077-170076 Capsella grandiflora
Cagra.0179s0042 10.0kb downstream 10.0kb downstream 11143 true Scaffold179: 170077-181219 Capsella grandiflora
Cagra.0179s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold179: 171220-181219 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380336 5261 Brassicaceae View MSA
123829018 5264 Brassicales-Malvales View MSA
124337783 5266 SBM View MSA
124243247 5268 Malvidae View MSA
124061056 5270 Rosid View MSA
123740400 5271 Pentapetalae View MSA
122786459 5272 Eudicot View MSA
122042677 5273 Angiosperm View MSA
121309998 5274 Embryophyte View MSA
123347607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain