Gene : Cagra.0193s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10992//PTHR10992:SF838 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Genomic Order:  6
Name:  ? Cagra.0193s0006 Secondary Identifier:  ? PAC:28894121
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LIPAS-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-7420 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0193s0006 0.5kb upstream 0.5kb upstream 2417 true Scaffold193: 20597-23013 Capsella grandiflora
Cagra.0193s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold193: 20597-21096 Capsella grandiflora
Cagra.0193s0006 0.5kb downstream 0.5kb downstream 2417 true Scaffold193: 21097-23513 Capsella grandiflora
Cagra.0193s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold193: 23014-23513 Capsella grandiflora
Cagra.0193s0006 1.0kb upstream 1.0kb upstream 2917 true Scaffold193: 20097-23013 Capsella grandiflora
Cagra.0193s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold193: 20097-21096 Capsella grandiflora
Cagra.0193s0006 1.0kb downstream 1.0kb downstream 2917 true Scaffold193: 21097-24013 Capsella grandiflora
Cagra.0193s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold193: 23014-24013 Capsella grandiflora
Cagra.0193s0006 2.0kb upstream 2.0kb upstream 3917 true Scaffold193: 19097-23013 Capsella grandiflora
Cagra.0193s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold193: 19097-21096 Capsella grandiflora
Cagra.0193s0006 2.0kb downstream 2.0kb downstream 3262 true Scaffold193: 21097-24358 Capsella grandiflora
Cagra.0193s0006 2.0kb downstream 2.0kb downstream 1345 false Scaffold193: 23014-24358 Capsella grandiflora
Cagra.0193s0006 5.0kb upstream 5.0kb upstream 6917 true Scaffold193: 16097-23013 Capsella grandiflora
Cagra.0193s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold193: 16097-21096 Capsella grandiflora
Cagra.0193s0006 5.0kb downstream 5.0kb downstream 3262 true Scaffold193: 21097-24358 Capsella grandiflora
Cagra.0193s0006 5.0kb downstream 5.0kb downstream 1345 false Scaffold193: 23014-24358 Capsella grandiflora
Cagra.0193s0006 10.0kb upstream 10.0kb upstream 11917 true Scaffold193: 11097-23013 Capsella grandiflora
Cagra.0193s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold193: 11097-21096 Capsella grandiflora
Cagra.0193s0006 10.0kb downstream 10.0kb downstream 3262 true Scaffold193: 21097-24358 Capsella grandiflora
Cagra.0193s0006 10.0kb downstream 10.0kb downstream 1345 false Scaffold193: 23014-24358 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364279 5261 Brassicaceae View MSA
123835615 5264 Brassicales-Malvales View MSA
124337239 5266 SBM View MSA
124245077 5268 Malvidae View MSA
124060734 5270 Rosid View MSA
123741073 5271 Pentapetalae View MSA
122790529 5272 Eudicot View MSA
122043617 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain