Gene : Cagra.0147s0066 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23180:SF268 - CALCIUM-DEPENDENT LIPID-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  66
Name:  ? Cagra.0147s0066 Secondary Identifier:  ? PAC:28896416
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0147s0066 0.5kb upstream 0.5kb upstream 2729 true Scaffold147: 249771-252499 Capsella grandiflora
Cagra.0147s0066 0.5kb upstream 0.5kb upstream 500 false Scaffold147: 252000-252499 Capsella grandiflora
Cagra.0147s0066 0.5kb downstream 0.5kb downstream 2729 true Scaffold147: 249271-251999 Capsella grandiflora
Cagra.0147s0066 0.5kb downstream 0.5kb downstream 500 false Scaffold147: 249271-249770 Capsella grandiflora
Cagra.0147s0066 1.0kb upstream 1.0kb upstream 3229 true Scaffold147: 249771-252999 Capsella grandiflora
Cagra.0147s0066 1.0kb upstream 1.0kb upstream 1000 false Scaffold147: 252000-252999 Capsella grandiflora
Cagra.0147s0066 1.0kb downstream 1.0kb downstream 3229 true Scaffold147: 248771-251999 Capsella grandiflora
Cagra.0147s0066 1.0kb downstream 1.0kb downstream 1000 false Scaffold147: 248771-249770 Capsella grandiflora
Cagra.0147s0066 2.0kb upstream 2.0kb upstream 4229 true Scaffold147: 249771-253999 Capsella grandiflora
Cagra.0147s0066 2.0kb upstream 2.0kb upstream 2000 false Scaffold147: 252000-253999 Capsella grandiflora
Cagra.0147s0066 2.0kb downstream 2.0kb downstream 4229 true Scaffold147: 247771-251999 Capsella grandiflora
Cagra.0147s0066 2.0kb downstream 2.0kb downstream 2000 false Scaffold147: 247771-249770 Capsella grandiflora
Cagra.0147s0066 5.0kb upstream 5.0kb upstream 7229 true Scaffold147: 249771-256999 Capsella grandiflora
Cagra.0147s0066 5.0kb upstream 5.0kb upstream 5000 false Scaffold147: 252000-256999 Capsella grandiflora
Cagra.0147s0066 5.0kb downstream 5.0kb downstream 7229 true Scaffold147: 244771-251999 Capsella grandiflora
Cagra.0147s0066 5.0kb downstream 5.0kb downstream 5000 false Scaffold147: 244771-249770 Capsella grandiflora
Cagra.0147s0066 10.0kb upstream 10.0kb upstream 12229 true Scaffold147: 249771-261999 Capsella grandiflora
Cagra.0147s0066 10.0kb upstream 10.0kb upstream 10000 false Scaffold147: 252000-261999 Capsella grandiflora
Cagra.0147s0066 10.0kb downstream 10.0kb downstream 12229 true Scaffold147: 239771-251999 Capsella grandiflora
Cagra.0147s0066 10.0kb downstream 10.0kb downstream 10000 false Scaffold147: 239771-249770 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360479 5261 Brassicaceae View MSA
123837188 5264 Brassicales-Malvales View MSA
124341901 5266 SBM View MSA
124249736 5268 Malvidae View MSA
124073070 5270 Rosid View MSA
123750672 5271 Pentapetalae View MSA
122773790 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain