Gene : Cagra.0147s0064 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23180:SF289 - CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN Genomic Order:  64
Name:  ? Cagra.0147s0064 Secondary Identifier:  ? PAC:28896394
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0147s0064 0.5kb upstream 0.5kb upstream 1699 true Scaffold147: 246827-248525 Capsella grandiflora
Cagra.0147s0064 0.5kb upstream 0.5kb upstream 500 false Scaffold147: 248026-248525 Capsella grandiflora
Cagra.0147s0064 0.5kb downstream 0.5kb downstream 1699 true Scaffold147: 246327-248025 Capsella grandiflora
Cagra.0147s0064 0.5kb downstream 0.5kb downstream 500 false Scaffold147: 246327-246826 Capsella grandiflora
Cagra.0147s0064 1.0kb upstream 1.0kb upstream 2199 true Scaffold147: 246827-249025 Capsella grandiflora
Cagra.0147s0064 1.0kb upstream 1.0kb upstream 1000 false Scaffold147: 248026-249025 Capsella grandiflora
Cagra.0147s0064 1.0kb downstream 1.0kb downstream 2199 true Scaffold147: 245827-248025 Capsella grandiflora
Cagra.0147s0064 1.0kb downstream 1.0kb downstream 1000 false Scaffold147: 245827-246826 Capsella grandiflora
Cagra.0147s0064 2.0kb upstream 2.0kb upstream 3199 true Scaffold147: 246827-250025 Capsella grandiflora
Cagra.0147s0064 2.0kb upstream 2.0kb upstream 2000 false Scaffold147: 248026-250025 Capsella grandiflora
Cagra.0147s0064 2.0kb downstream 2.0kb downstream 3199 true Scaffold147: 244827-248025 Capsella grandiflora
Cagra.0147s0064 2.0kb downstream 2.0kb downstream 2000 false Scaffold147: 244827-246826 Capsella grandiflora
Cagra.0147s0064 5.0kb upstream 5.0kb upstream 6199 true Scaffold147: 246827-253025 Capsella grandiflora
Cagra.0147s0064 5.0kb upstream 5.0kb upstream 5000 false Scaffold147: 248026-253025 Capsella grandiflora
Cagra.0147s0064 5.0kb downstream 5.0kb downstream 6199 true Scaffold147: 241827-248025 Capsella grandiflora
Cagra.0147s0064 5.0kb downstream 5.0kb downstream 5000 false Scaffold147: 241827-246826 Capsella grandiflora
Cagra.0147s0064 10.0kb upstream 10.0kb upstream 11199 true Scaffold147: 246827-258025 Capsella grandiflora
Cagra.0147s0064 10.0kb upstream 10.0kb upstream 10000 false Scaffold147: 248026-258025 Capsella grandiflora
Cagra.0147s0064 10.0kb downstream 10.0kb downstream 11199 true Scaffold147: 236827-248025 Capsella grandiflora
Cagra.0147s0064 10.0kb downstream 10.0kb downstream 10000 false Scaffold147: 236827-246826 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375233 5261 Brassicaceae View MSA
123800908 5264 Brassicales-Malvales View MSA
124298268 5266 SBM View MSA
124249736 5268 Malvidae View MSA
124073070 5270 Rosid View MSA
123750672 5271 Pentapetalae View MSA
122773790 5272 Eudicot View MSA
122048793 5273 Angiosperm View MSA
121311115 5274 Embryophyte View MSA
123348457 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain