Gene : Cagra.0154s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33923:SF3 - CALMODULIN-BINDING PROTEIN Genomic Order:  4
Name:  ? Cagra.0154s0004 Secondary Identifier:  ? PAC:28918977
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0154s0004 0.5kb upstream 0.5kb upstream 5689 true Scaffold154: 6435-12123 Capsella grandiflora
Cagra.0154s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold154: 6435-6934 Capsella grandiflora
Cagra.0154s0004 0.5kb downstream 0.5kb downstream 5689 true Scaffold154: 6935-12623 Capsella grandiflora
Cagra.0154s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold154: 12124-12623 Capsella grandiflora
Cagra.0154s0004 1.0kb upstream 1.0kb upstream 6189 true Scaffold154: 5935-12123 Capsella grandiflora
Cagra.0154s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold154: 5935-6934 Capsella grandiflora
Cagra.0154s0004 1.0kb downstream 1.0kb downstream 6189 true Scaffold154: 6935-13123 Capsella grandiflora
Cagra.0154s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold154: 12124-13123 Capsella grandiflora
Cagra.0154s0004 2.0kb upstream 2.0kb upstream 7189 true Scaffold154: 4935-12123 Capsella grandiflora
Cagra.0154s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold154: 4935-6934 Capsella grandiflora
Cagra.0154s0004 2.0kb downstream 2.0kb downstream 7189 true Scaffold154: 6935-14123 Capsella grandiflora
Cagra.0154s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold154: 12124-14123 Capsella grandiflora
Cagra.0154s0004 5.0kb upstream 5.0kb upstream 10189 true Scaffold154: 1935-12123 Capsella grandiflora
Cagra.0154s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold154: 1935-6934 Capsella grandiflora
Cagra.0154s0004 5.0kb downstream 5.0kb downstream 10189 true Scaffold154: 6935-17123 Capsella grandiflora
Cagra.0154s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold154: 12124-17123 Capsella grandiflora
Cagra.0154s0004 10.0kb upstream 10.0kb upstream 12123 true Scaffold154: 1-12123 Capsella grandiflora
Cagra.0154s0004 10.0kb upstream 10.0kb upstream 6934 false Scaffold154: 1-6934 Capsella grandiflora
Cagra.0154s0004 10.0kb downstream 10.0kb downstream 15189 true Scaffold154: 6935-22123 Capsella grandiflora
Cagra.0154s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold154: 12124-22123 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367533 5261 Brassicaceae View MSA
123828490 5264 Brassicales-Malvales View MSA
124339332 5266 SBM View MSA
124241150 5268 Malvidae View MSA
124070839 5270 Rosid View MSA
123751830 5271 Pentapetalae View MSA
122794379 5272 Eudicot View MSA
122048644 5273 Angiosperm View MSA
121311054 5274 Embryophyte View MSA
123348408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain