Gene : Cagra.0154s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24221:SF112 - ABC TRANSPORTER B FAMILY MEMBER 29, CHLOROPLASTIC Genomic Order:  13
Name:  ? Cagra.0154s0013 Secondary Identifier:  ? PAC:28918983
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0154s0013 0.5kb upstream 0.5kb upstream 3626 true Scaffold154: 29446-33071 Capsella grandiflora
Cagra.0154s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold154: 29446-29945 Capsella grandiflora
Cagra.0154s0013 0.5kb downstream 0.5kb downstream 3626 true Scaffold154: 29946-33571 Capsella grandiflora
Cagra.0154s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold154: 33072-33571 Capsella grandiflora
Cagra.0154s0013 1.0kb upstream 1.0kb upstream 4126 true Scaffold154: 28946-33071 Capsella grandiflora
Cagra.0154s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold154: 28946-29945 Capsella grandiflora
Cagra.0154s0013 1.0kb downstream 1.0kb downstream 4126 true Scaffold154: 29946-34071 Capsella grandiflora
Cagra.0154s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold154: 33072-34071 Capsella grandiflora
Cagra.0154s0013 2.0kb upstream 2.0kb upstream 5126 true Scaffold154: 27946-33071 Capsella grandiflora
Cagra.0154s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold154: 27946-29945 Capsella grandiflora
Cagra.0154s0013 2.0kb downstream 2.0kb downstream 5126 true Scaffold154: 29946-35071 Capsella grandiflora
Cagra.0154s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold154: 33072-35071 Capsella grandiflora
Cagra.0154s0013 5.0kb upstream 5.0kb upstream 8126 true Scaffold154: 24946-33071 Capsella grandiflora
Cagra.0154s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold154: 24946-29945 Capsella grandiflora
Cagra.0154s0013 5.0kb downstream 5.0kb downstream 8126 true Scaffold154: 29946-38071 Capsella grandiflora
Cagra.0154s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold154: 33072-38071 Capsella grandiflora
Cagra.0154s0013 10.0kb upstream 10.0kb upstream 13126 true Scaffold154: 19946-33071 Capsella grandiflora
Cagra.0154s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold154: 19946-29945 Capsella grandiflora
Cagra.0154s0013 10.0kb downstream 10.0kb downstream 13126 true Scaffold154: 29946-43071 Capsella grandiflora
Cagra.0154s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold154: 33072-43071 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332676 5261 Brassicaceae Singleton cluster - no MSA
123838215 5264 Brassicales-Malvales View MSA
124342187 5266 SBM View MSA
124239694 5268 Malvidae View MSA
124069170 5270 Rosid View MSA
123739432 5271 Pentapetalae View MSA
122788851 5272 Eudicot View MSA
122048026 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121344960 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain