Gene : Cagra.0154s0023 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF66 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Genomic Order:  23
Name:  ? Cagra.0154s0023 Secondary Identifier:  ? PAC:28918988
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5980 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0154s0023 0.5kb upstream 0.5kb upstream 3423 true Scaffold154: 72687-76109 Capsella grandiflora
Cagra.0154s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold154: 72687-73186 Capsella grandiflora
Cagra.0154s0023 0.5kb downstream 0.5kb downstream 3423 true Scaffold154: 73187-76609 Capsella grandiflora
Cagra.0154s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold154: 76110-76609 Capsella grandiflora
Cagra.0154s0023 1.0kb upstream 1.0kb upstream 3923 true Scaffold154: 72187-76109 Capsella grandiflora
Cagra.0154s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold154: 72187-73186 Capsella grandiflora
Cagra.0154s0023 1.0kb downstream 1.0kb downstream 3923 true Scaffold154: 73187-77109 Capsella grandiflora
Cagra.0154s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold154: 76110-77109 Capsella grandiflora
Cagra.0154s0023 2.0kb upstream 2.0kb upstream 4923 true Scaffold154: 71187-76109 Capsella grandiflora
Cagra.0154s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold154: 71187-73186 Capsella grandiflora
Cagra.0154s0023 2.0kb downstream 2.0kb downstream 4923 true Scaffold154: 73187-78109 Capsella grandiflora
Cagra.0154s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold154: 76110-78109 Capsella grandiflora
Cagra.0154s0023 5.0kb upstream 5.0kb upstream 7923 true Scaffold154: 68187-76109 Capsella grandiflora
Cagra.0154s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold154: 68187-73186 Capsella grandiflora
Cagra.0154s0023 5.0kb downstream 5.0kb downstream 7923 true Scaffold154: 73187-81109 Capsella grandiflora
Cagra.0154s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold154: 76110-81109 Capsella grandiflora
Cagra.0154s0023 10.0kb upstream 10.0kb upstream 12923 true Scaffold154: 63187-76109 Capsella grandiflora
Cagra.0154s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold154: 63187-73186 Capsella grandiflora
Cagra.0154s0023 10.0kb downstream 10.0kb downstream 12923 true Scaffold154: 73187-86109 Capsella grandiflora
Cagra.0154s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold154: 76110-86109 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361320 5261 Brassicaceae View MSA
123836554 5264 Brassicales-Malvales View MSA
124350452 5266 SBM View MSA
124244067 5268 Malvidae View MSA
124070625 5270 Rosid View MSA
123746709 5271 Pentapetalae View MSA
122795318 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain