Gene : Cagra.0167s0004 C. grandiflora v1.1
Defline:  (1 of 4) PTHR31003:SF4 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K13N2-RELATED Genomic Order:  4
Name:  ? Cagra.0167s0004 Secondary Identifier:  ? PAC:28899315
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0167s0004 0.5kb upstream 0.5kb upstream 2641 true Scaffold167: 13679-16319 Capsella grandiflora
Cagra.0167s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold167: 13679-14178 Capsella grandiflora
Cagra.0167s0004 0.5kb downstream 0.5kb downstream 2641 true Scaffold167: 14179-16819 Capsella grandiflora
Cagra.0167s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold167: 16320-16819 Capsella grandiflora
Cagra.0167s0004 1.0kb upstream 1.0kb upstream 3141 true Scaffold167: 13179-16319 Capsella grandiflora
Cagra.0167s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold167: 13179-14178 Capsella grandiflora
Cagra.0167s0004 1.0kb downstream 1.0kb downstream 3141 true Scaffold167: 14179-17319 Capsella grandiflora
Cagra.0167s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold167: 16320-17319 Capsella grandiflora
Cagra.0167s0004 2.0kb upstream 2.0kb upstream 4141 true Scaffold167: 12179-16319 Capsella grandiflora
Cagra.0167s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold167: 12179-14178 Capsella grandiflora
Cagra.0167s0004 2.0kb downstream 2.0kb downstream 4141 true Scaffold167: 14179-18319 Capsella grandiflora
Cagra.0167s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold167: 16320-18319 Capsella grandiflora
Cagra.0167s0004 5.0kb upstream 5.0kb upstream 7141 true Scaffold167: 9179-16319 Capsella grandiflora
Cagra.0167s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold167: 9179-14178 Capsella grandiflora
Cagra.0167s0004 5.0kb downstream 5.0kb downstream 7141 true Scaffold167: 14179-21319 Capsella grandiflora
Cagra.0167s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold167: 16320-21319 Capsella grandiflora
Cagra.0167s0004 10.0kb upstream 10.0kb upstream 12141 true Scaffold167: 4179-16319 Capsella grandiflora
Cagra.0167s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold167: 4179-14178 Capsella grandiflora
Cagra.0167s0004 10.0kb downstream 10.0kb downstream 12141 true Scaffold167: 14179-26319 Capsella grandiflora
Cagra.0167s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold167: 16320-26319 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365575 5261 Brassicaceae View MSA
123798983 5264 Brassicales-Malvales View MSA
124296554 5266 SBM View MSA
124250696 5268 Malvidae View MSA
124062627 5270 Rosid View MSA
123739089 5271 Pentapetalae View MSA
122790332 5272 Eudicot View MSA
122043358 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain