Gene : Cagra.0167s0010 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23151//PTHR23151:SF61 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Genomic Order:  10
Name:  ? Cagra.0167s0010 Secondary Identifier:  ? PAC:28899307
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5173 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PYRUVDEHYD-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0167s0010 0.5kb upstream 0.5kb upstream 2781 true Scaffold167: 43267-46047 Capsella grandiflora
Cagra.0167s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold167: 43267-43766 Capsella grandiflora
Cagra.0167s0010 0.5kb downstream 0.5kb downstream 2781 true Scaffold167: 43767-46547 Capsella grandiflora
Cagra.0167s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold167: 46048-46547 Capsella grandiflora
Cagra.0167s0010 1.0kb upstream 1.0kb upstream 3281 true Scaffold167: 42767-46047 Capsella grandiflora
Cagra.0167s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold167: 42767-43766 Capsella grandiflora
Cagra.0167s0010 1.0kb downstream 1.0kb downstream 3281 true Scaffold167: 43767-47047 Capsella grandiflora
Cagra.0167s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold167: 46048-47047 Capsella grandiflora
Cagra.0167s0010 2.0kb upstream 2.0kb upstream 4281 true Scaffold167: 41767-46047 Capsella grandiflora
Cagra.0167s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold167: 41767-43766 Capsella grandiflora
Cagra.0167s0010 2.0kb downstream 2.0kb downstream 4281 true Scaffold167: 43767-48047 Capsella grandiflora
Cagra.0167s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold167: 46048-48047 Capsella grandiflora
Cagra.0167s0010 5.0kb upstream 5.0kb upstream 7281 true Scaffold167: 38767-46047 Capsella grandiflora
Cagra.0167s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold167: 38767-43766 Capsella grandiflora
Cagra.0167s0010 5.0kb downstream 5.0kb downstream 7281 true Scaffold167: 43767-51047 Capsella grandiflora
Cagra.0167s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold167: 46048-51047 Capsella grandiflora
Cagra.0167s0010 10.0kb upstream 10.0kb upstream 12281 true Scaffold167: 33767-46047 Capsella grandiflora
Cagra.0167s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold167: 33767-43766 Capsella grandiflora
Cagra.0167s0010 10.0kb downstream 10.0kb downstream 12281 true Scaffold167: 43767-56047 Capsella grandiflora
Cagra.0167s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold167: 46048-56047 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368345 5261 Brassicaceae View MSA
123834524 5264 Brassicales-Malvales View MSA
124341076 5266 SBM View MSA
124252180 5268 Malvidae View MSA
124064326 5270 Rosid View MSA
123740980 5271 Pentapetalae View MSA
122792137 5272 Eudicot View MSA
122047464 5273 Angiosperm View MSA
121347035 5274 Embryophyte View MSA
123424416 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain