Gene : Cagra.0133s0115 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22811:SF50 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN P24BETA2 Genomic Order:  115
Name:  ? Cagra.0133s0115 Secondary Identifier:  ? PAC:28899505
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0115 0.5kb upstream 0.5kb upstream 2106 true Scaffold133: 425765-427870 Capsella grandiflora
Cagra.0133s0115 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 425765-426264 Capsella grandiflora
Cagra.0133s0115 0.5kb downstream 0.5kb downstream 2106 true Scaffold133: 426265-428370 Capsella grandiflora
Cagra.0133s0115 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 427871-428370 Capsella grandiflora
Cagra.0133s0115 1.0kb upstream 1.0kb upstream 2606 true Scaffold133: 425265-427870 Capsella grandiflora
Cagra.0133s0115 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 425265-426264 Capsella grandiflora
Cagra.0133s0115 1.0kb downstream 1.0kb downstream 2606 true Scaffold133: 426265-428870 Capsella grandiflora
Cagra.0133s0115 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 427871-428870 Capsella grandiflora
Cagra.0133s0115 2.0kb upstream 2.0kb upstream 3606 true Scaffold133: 424265-427870 Capsella grandiflora
Cagra.0133s0115 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 424265-426264 Capsella grandiflora
Cagra.0133s0115 2.0kb downstream 2.0kb downstream 3606 true Scaffold133: 426265-429870 Capsella grandiflora
Cagra.0133s0115 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 427871-429870 Capsella grandiflora
Cagra.0133s0115 5.0kb upstream 5.0kb upstream 6606 true Scaffold133: 421265-427870 Capsella grandiflora
Cagra.0133s0115 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 421265-426264 Capsella grandiflora
Cagra.0133s0115 5.0kb downstream 5.0kb downstream 6606 true Scaffold133: 426265-432870 Capsella grandiflora
Cagra.0133s0115 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 427871-432870 Capsella grandiflora
Cagra.0133s0115 10.0kb upstream 10.0kb upstream 11606 true Scaffold133: 416265-427870 Capsella grandiflora
Cagra.0133s0115 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 416265-426264 Capsella grandiflora
Cagra.0133s0115 10.0kb downstream 10.0kb downstream 11606 true Scaffold133: 426265-437870 Capsella grandiflora
Cagra.0133s0115 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 427871-437870 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362679 5261 Brassicaceae View MSA
123835541 5264 Brassicales-Malvales View MSA
124350122 5266 SBM View MSA
124242385 5268 Malvidae View MSA
124072381 5270 Rosid View MSA
123751948 5271 Pentapetalae View MSA
122788237 5272 Eudicot View MSA
122045343 5273 Angiosperm View MSA
121343966 5274 Embryophyte View MSA
123427292 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain