Gene : Cagra.0133s0125 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21736:SF20 - PROTEIN OBERON 1-RELATED Genomic Order:  125
Name:  ? Cagra.0133s0125 Secondary Identifier:  ? PAC:28899536
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0125 0.5kb upstream 0.5kb upstream 2396 true Scaffold133: 458511-460906 Capsella grandiflora
Cagra.0133s0125 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 458511-459010 Capsella grandiflora
Cagra.0133s0125 0.5kb downstream 0.5kb downstream 2396 true Scaffold133: 459011-461406 Capsella grandiflora
Cagra.0133s0125 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 460907-461406 Capsella grandiflora
Cagra.0133s0125 1.0kb upstream 1.0kb upstream 2896 true Scaffold133: 458011-460906 Capsella grandiflora
Cagra.0133s0125 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 458011-459010 Capsella grandiflora
Cagra.0133s0125 1.0kb downstream 1.0kb downstream 2896 true Scaffold133: 459011-461906 Capsella grandiflora
Cagra.0133s0125 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 460907-461906 Capsella grandiflora
Cagra.0133s0125 2.0kb upstream 2.0kb upstream 3896 true Scaffold133: 457011-460906 Capsella grandiflora
Cagra.0133s0125 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 457011-459010 Capsella grandiflora
Cagra.0133s0125 2.0kb downstream 2.0kb downstream 3896 true Scaffold133: 459011-462906 Capsella grandiflora
Cagra.0133s0125 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 460907-462906 Capsella grandiflora
Cagra.0133s0125 5.0kb upstream 5.0kb upstream 6896 true Scaffold133: 454011-460906 Capsella grandiflora
Cagra.0133s0125 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 454011-459010 Capsella grandiflora
Cagra.0133s0125 5.0kb downstream 5.0kb downstream 6896 true Scaffold133: 459011-465906 Capsella grandiflora
Cagra.0133s0125 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 460907-465906 Capsella grandiflora
Cagra.0133s0125 10.0kb upstream 10.0kb upstream 11896 true Scaffold133: 449011-460906 Capsella grandiflora
Cagra.0133s0125 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 449011-459010 Capsella grandiflora
Cagra.0133s0125 10.0kb downstream 10.0kb downstream 11896 true Scaffold133: 459011-470906 Capsella grandiflora
Cagra.0133s0125 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 460907-470906 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366980 5261 Brassicaceae View MSA
123837666 5264 Brassicales-Malvales View MSA
124337418 5266 SBM View MSA
124242275 5268 Malvidae View MSA
124068106 5270 Rosid View MSA
123747254 5271 Pentapetalae View MSA
122789487 5272 Eudicot View MSA
122041658 5273 Angiosperm View MSA
121346503 5274 Embryophyte View MSA
123380393 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain