Gene : Cagra.0134s0015 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13468:SF6 - DEK DOMAIN-CONTAINING CHROMATIN ASSOCIATED PROTEIN Genomic Order:  15
Name:  ? Cagra.0134s0015 Secondary Identifier:  ? PAC:28915266
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0134s0015 0.5kb upstream 0.5kb upstream 3887 true Scaffold134: 46037-49923 Capsella grandiflora
Cagra.0134s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold134: 46037-46536 Capsella grandiflora
Cagra.0134s0015 0.5kb downstream 0.5kb downstream 3887 true Scaffold134: 46537-50423 Capsella grandiflora
Cagra.0134s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold134: 49924-50423 Capsella grandiflora
Cagra.0134s0015 1.0kb upstream 1.0kb upstream 4387 true Scaffold134: 45537-49923 Capsella grandiflora
Cagra.0134s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold134: 45537-46536 Capsella grandiflora
Cagra.0134s0015 1.0kb downstream 1.0kb downstream 4387 true Scaffold134: 46537-50923 Capsella grandiflora
Cagra.0134s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold134: 49924-50923 Capsella grandiflora
Cagra.0134s0015 2.0kb upstream 2.0kb upstream 5387 true Scaffold134: 44537-49923 Capsella grandiflora
Cagra.0134s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold134: 44537-46536 Capsella grandiflora
Cagra.0134s0015 2.0kb downstream 2.0kb downstream 5387 true Scaffold134: 46537-51923 Capsella grandiflora
Cagra.0134s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold134: 49924-51923 Capsella grandiflora
Cagra.0134s0015 5.0kb upstream 5.0kb upstream 8387 true Scaffold134: 41537-49923 Capsella grandiflora
Cagra.0134s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold134: 41537-46536 Capsella grandiflora
Cagra.0134s0015 5.0kb downstream 5.0kb downstream 8175 true Scaffold134: 46537-54711 Capsella grandiflora
Cagra.0134s0015 5.0kb downstream 5.0kb downstream 4788 false Scaffold134: 49924-54711 Capsella grandiflora
Cagra.0134s0015 10.0kb upstream 10.0kb upstream 13387 true Scaffold134: 36537-49923 Capsella grandiflora
Cagra.0134s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold134: 36537-46536 Capsella grandiflora
Cagra.0134s0015 10.0kb downstream 10.0kb downstream 8175 true Scaffold134: 46537-54711 Capsella grandiflora
Cagra.0134s0015 10.0kb downstream 10.0kb downstream 4788 false Scaffold134: 49924-54711 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375237 5261 Brassicaceae View MSA
123841081 5264 Brassicales-Malvales View MSA
124344015 5266 SBM View MSA
124251106 5268 Malvidae View MSA
124072894 5270 Rosid View MSA
123748946 5271 Pentapetalae View MSA
122791456 5272 Eudicot View MSA
122042773 5273 Angiosperm View MSA
121346519 5274 Embryophyte View MSA
123426401 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain