Gene : Cagra.0147s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR34050:SF1 - ORGANELLAR DNA-BINDING PROTEIN Genomic Order:  12
Name:  ? Cagra.0147s0012 Secondary Identifier:  ? PAC:28896371
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0147s0012 0.5kb upstream 0.5kb upstream 1816 true Scaffold147: 37391-39206 Capsella grandiflora
Cagra.0147s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold147: 37391-37890 Capsella grandiflora
Cagra.0147s0012 0.5kb downstream 0.5kb downstream 1816 true Scaffold147: 37891-39706 Capsella grandiflora
Cagra.0147s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold147: 39207-39706 Capsella grandiflora
Cagra.0147s0012 1.0kb upstream 1.0kb upstream 2316 true Scaffold147: 36891-39206 Capsella grandiflora
Cagra.0147s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold147: 36891-37890 Capsella grandiflora
Cagra.0147s0012 1.0kb downstream 1.0kb downstream 2316 true Scaffold147: 37891-40206 Capsella grandiflora
Cagra.0147s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold147: 39207-40206 Capsella grandiflora
Cagra.0147s0012 2.0kb upstream 2.0kb upstream 3316 true Scaffold147: 35891-39206 Capsella grandiflora
Cagra.0147s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold147: 35891-37890 Capsella grandiflora
Cagra.0147s0012 2.0kb downstream 2.0kb downstream 3316 true Scaffold147: 37891-41206 Capsella grandiflora
Cagra.0147s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold147: 39207-41206 Capsella grandiflora
Cagra.0147s0012 5.0kb upstream 5.0kb upstream 6316 true Scaffold147: 32891-39206 Capsella grandiflora
Cagra.0147s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold147: 32891-37890 Capsella grandiflora
Cagra.0147s0012 5.0kb downstream 5.0kb downstream 6316 true Scaffold147: 37891-44206 Capsella grandiflora
Cagra.0147s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold147: 39207-44206 Capsella grandiflora
Cagra.0147s0012 10.0kb upstream 10.0kb upstream 11316 true Scaffold147: 27891-39206 Capsella grandiflora
Cagra.0147s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold147: 27891-37890 Capsella grandiflora
Cagra.0147s0012 10.0kb downstream 10.0kb downstream 11316 true Scaffold147: 37891-49206 Capsella grandiflora
Cagra.0147s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold147: 39207-49206 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361253 5261 Brassicaceae View MSA
123832304 5264 Brassicales-Malvales View MSA
124344100 5266 SBM View MSA
124244816 5268 Malvidae View MSA
124064303 5270 Rosid View MSA
123745540 5271 Pentapetalae View MSA
122794464 5272 Eudicot View MSA
122043827 5273 Angiosperm View MSA
121348522 5274 Embryophyte View MSA
123380896 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain