Gene : Cagra.0147s0022 C. grandiflora v1.1
Defline:  (1 of 5) PTHR13935:SF41 - ACHAETE-SCUTE HOMOLOG 3 Genomic Order:  22
Name:  ? Cagra.0147s0022 Secondary Identifier:  ? PAC:28896425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0147s0022 0.5kb upstream 0.5kb upstream 1888 true Scaffold147: 77194-79081 Capsella grandiflora
Cagra.0147s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold147: 77194-77693 Capsella grandiflora
Cagra.0147s0022 0.5kb downstream 0.5kb downstream 1888 true Scaffold147: 77694-79581 Capsella grandiflora
Cagra.0147s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold147: 79082-79581 Capsella grandiflora
Cagra.0147s0022 1.0kb upstream 1.0kb upstream 2388 true Scaffold147: 76694-79081 Capsella grandiflora
Cagra.0147s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold147: 76694-77693 Capsella grandiflora
Cagra.0147s0022 1.0kb downstream 1.0kb downstream 2388 true Scaffold147: 77694-80081 Capsella grandiflora
Cagra.0147s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold147: 79082-80081 Capsella grandiflora
Cagra.0147s0022 2.0kb upstream 2.0kb upstream 3388 true Scaffold147: 75694-79081 Capsella grandiflora
Cagra.0147s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold147: 75694-77693 Capsella grandiflora
Cagra.0147s0022 2.0kb downstream 2.0kb downstream 3388 true Scaffold147: 77694-81081 Capsella grandiflora
Cagra.0147s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold147: 79082-81081 Capsella grandiflora
Cagra.0147s0022 5.0kb upstream 5.0kb upstream 6388 true Scaffold147: 72694-79081 Capsella grandiflora
Cagra.0147s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold147: 72694-77693 Capsella grandiflora
Cagra.0147s0022 5.0kb downstream 5.0kb downstream 6388 true Scaffold147: 77694-84081 Capsella grandiflora
Cagra.0147s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold147: 79082-84081 Capsella grandiflora
Cagra.0147s0022 10.0kb upstream 10.0kb upstream 11388 true Scaffold147: 67694-79081 Capsella grandiflora
Cagra.0147s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold147: 67694-77693 Capsella grandiflora
Cagra.0147s0022 10.0kb downstream 10.0kb downstream 11388 true Scaffold147: 77694-89081 Capsella grandiflora
Cagra.0147s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold147: 79082-89081 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361399 5261 Brassicaceae View MSA
123798156 5264 Brassicales-Malvales View MSA
124349847 5266 SBM View MSA
124254233 5268 Malvidae View MSA
124071325 5270 Rosid View MSA
123751421 5271 Pentapetalae View MSA
122790904 5272 Eudicot View MSA
122049440 5273 Angiosperm View MSA
121311403 5274 Embryophyte View MSA
123348704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain