Gene : Cagra.0147s0038 C. grandiflora v1.1
Defline:  (1 of 43) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  38
Name:  ? Cagra.0147s0038 Secondary Identifier:  ? PAC:28896354
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0147s0038 0.5kb upstream 0.5kb upstream 4692 true Scaffold147: 133409-138100 Capsella grandiflora
Cagra.0147s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold147: 133409-133908 Capsella grandiflora
Cagra.0147s0038 0.5kb downstream 0.5kb downstream 4692 true Scaffold147: 133909-138600 Capsella grandiflora
Cagra.0147s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold147: 138101-138600 Capsella grandiflora
Cagra.0147s0038 1.0kb upstream 1.0kb upstream 5192 true Scaffold147: 132909-138100 Capsella grandiflora
Cagra.0147s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold147: 132909-133908 Capsella grandiflora
Cagra.0147s0038 1.0kb downstream 1.0kb downstream 5192 true Scaffold147: 133909-139100 Capsella grandiflora
Cagra.0147s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold147: 138101-139100 Capsella grandiflora
Cagra.0147s0038 2.0kb upstream 2.0kb upstream 6192 true Scaffold147: 131909-138100 Capsella grandiflora
Cagra.0147s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold147: 131909-133908 Capsella grandiflora
Cagra.0147s0038 2.0kb downstream 2.0kb downstream 6192 true Scaffold147: 133909-140100 Capsella grandiflora
Cagra.0147s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold147: 138101-140100 Capsella grandiflora
Cagra.0147s0038 5.0kb upstream 5.0kb upstream 9192 true Scaffold147: 128909-138100 Capsella grandiflora
Cagra.0147s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold147: 128909-133908 Capsella grandiflora
Cagra.0147s0038 5.0kb downstream 5.0kb downstream 9192 true Scaffold147: 133909-143100 Capsella grandiflora
Cagra.0147s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold147: 138101-143100 Capsella grandiflora
Cagra.0147s0038 10.0kb upstream 10.0kb upstream 14192 true Scaffold147: 123909-138100 Capsella grandiflora
Cagra.0147s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold147: 123909-133908 Capsella grandiflora
Cagra.0147s0038 10.0kb downstream 10.0kb downstream 14192 true Scaffold147: 133909-148100 Capsella grandiflora
Cagra.0147s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold147: 138101-148100 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375330 5261 Brassicaceae View MSA
123831875 5264 Brassicales-Malvales View MSA
124342962 5266 SBM View MSA
124240747 5268 Malvidae View MSA
124063313 5270 Rosid View MSA
123738652 5271 Pentapetalae View MSA
122793005 5272 Eudicot View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain