Gene : Cagra.0147s0036 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31419:SF2 - AUXIN EFFLUX CARRIER FAMILY PROTEIN Genomic Order:  36
Name:  ? Cagra.0147s0036 Secondary Identifier:  ? PAC:28896398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0147s0036 0.5kb upstream 0.5kb upstream 2227 true Scaffold147: 123105-125331 Capsella grandiflora
Cagra.0147s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold147: 124832-125331 Capsella grandiflora
Cagra.0147s0036 0.5kb downstream 0.5kb downstream 2227 true Scaffold147: 122605-124831 Capsella grandiflora
Cagra.0147s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold147: 122605-123104 Capsella grandiflora
Cagra.0147s0036 1.0kb upstream 1.0kb upstream 2727 true Scaffold147: 123105-125831 Capsella grandiflora
Cagra.0147s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold147: 124832-125831 Capsella grandiflora
Cagra.0147s0036 1.0kb downstream 1.0kb downstream 2727 true Scaffold147: 122105-124831 Capsella grandiflora
Cagra.0147s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold147: 122105-123104 Capsella grandiflora
Cagra.0147s0036 2.0kb upstream 2.0kb upstream 3727 true Scaffold147: 123105-126831 Capsella grandiflora
Cagra.0147s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold147: 124832-126831 Capsella grandiflora
Cagra.0147s0036 2.0kb downstream 2.0kb downstream 3727 true Scaffold147: 121105-124831 Capsella grandiflora
Cagra.0147s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold147: 121105-123104 Capsella grandiflora
Cagra.0147s0036 5.0kb upstream 5.0kb upstream 6727 true Scaffold147: 123105-129831 Capsella grandiflora
Cagra.0147s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold147: 124832-129831 Capsella grandiflora
Cagra.0147s0036 5.0kb downstream 5.0kb downstream 6727 true Scaffold147: 118105-124831 Capsella grandiflora
Cagra.0147s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold147: 118105-123104 Capsella grandiflora
Cagra.0147s0036 10.0kb upstream 10.0kb upstream 11727 true Scaffold147: 123105-134831 Capsella grandiflora
Cagra.0147s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold147: 124832-134831 Capsella grandiflora
Cagra.0147s0036 10.0kb downstream 10.0kb downstream 11727 true Scaffold147: 113105-124831 Capsella grandiflora
Cagra.0147s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold147: 113105-123104 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369701 5261 Brassicaceae View MSA
123833121 5264 Brassicales-Malvales View MSA
124336624 5266 SBM View MSA
124244986 5268 Malvidae View MSA
124070686 5270 Rosid View MSA
123745626 5271 Pentapetalae View MSA
122796899 5272 Eudicot View MSA
122045179 5273 Angiosperm View MSA
123429004 5275 Viridiplantae View MSA
121343844 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain