Gene : Cagra.0147s0050 C. grandiflora v1.1
Defline:  (1 of 13) PF06886 - Targeting protein for Xklp2 (TPX2) (TPX2) Genomic Order:  50
Name:  ? Cagra.0147s0050 Secondary Identifier:  ? PAC:28896356
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0147s0050 0.5kb upstream 0.5kb upstream 3379 true Scaffold147: 187672-191050 Capsella grandiflora
Cagra.0147s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold147: 190551-191050 Capsella grandiflora
Cagra.0147s0050 0.5kb downstream 0.5kb downstream 3379 true Scaffold147: 187172-190550 Capsella grandiflora
Cagra.0147s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold147: 187172-187671 Capsella grandiflora
Cagra.0147s0050 1.0kb upstream 1.0kb upstream 3879 true Scaffold147: 187672-191550 Capsella grandiflora
Cagra.0147s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold147: 190551-191550 Capsella grandiflora
Cagra.0147s0050 1.0kb downstream 1.0kb downstream 3879 true Scaffold147: 186672-190550 Capsella grandiflora
Cagra.0147s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold147: 186672-187671 Capsella grandiflora
Cagra.0147s0050 2.0kb upstream 2.0kb upstream 4879 true Scaffold147: 187672-192550 Capsella grandiflora
Cagra.0147s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold147: 190551-192550 Capsella grandiflora
Cagra.0147s0050 2.0kb downstream 2.0kb downstream 4879 true Scaffold147: 185672-190550 Capsella grandiflora
Cagra.0147s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold147: 185672-187671 Capsella grandiflora
Cagra.0147s0050 5.0kb upstream 5.0kb upstream 7879 true Scaffold147: 187672-195550 Capsella grandiflora
Cagra.0147s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold147: 190551-195550 Capsella grandiflora
Cagra.0147s0050 5.0kb downstream 5.0kb downstream 7879 true Scaffold147: 182672-190550 Capsella grandiflora
Cagra.0147s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold147: 182672-187671 Capsella grandiflora
Cagra.0147s0050 10.0kb upstream 10.0kb upstream 12879 true Scaffold147: 187672-200550 Capsella grandiflora
Cagra.0147s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold147: 190551-200550 Capsella grandiflora
Cagra.0147s0050 10.0kb downstream 10.0kb downstream 12879 true Scaffold147: 177672-190550 Capsella grandiflora
Cagra.0147s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold147: 177672-187671 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368954 5261 Brassicaceae View MSA
123799688 5264 Brassicales-Malvales View MSA
124349901 5266 SBM View MSA
124252673 5268 Malvidae View MSA
124072865 5270 Rosid View MSA
123746894 5271 Pentapetalae View MSA
122791209 5272 Eudicot View MSA
122048552 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain