Gene : Cagra.0147s0051 C. grandiflora v1.1
Defline:  (1 of 15) PF03547 - Membrane transport protein (Mem_trans) Genomic Order:  51
Name:  ? Cagra.0147s0051 Secondary Identifier:  ? PAC:28896367
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0147s0051 0.5kb upstream 0.5kb upstream 3865 true Scaffold147: 197223-201087 Capsella grandiflora
Cagra.0147s0051 0.5kb upstream 0.5kb upstream 500 false Scaffold147: 200588-201087 Capsella grandiflora
Cagra.0147s0051 0.5kb downstream 0.5kb downstream 3865 true Scaffold147: 196723-200587 Capsella grandiflora
Cagra.0147s0051 0.5kb downstream 0.5kb downstream 500 false Scaffold147: 196723-197222 Capsella grandiflora
Cagra.0147s0051 1.0kb upstream 1.0kb upstream 4365 true Scaffold147: 197223-201587 Capsella grandiflora
Cagra.0147s0051 1.0kb upstream 1.0kb upstream 1000 false Scaffold147: 200588-201587 Capsella grandiflora
Cagra.0147s0051 1.0kb downstream 1.0kb downstream 4365 true Scaffold147: 196223-200587 Capsella grandiflora
Cagra.0147s0051 1.0kb downstream 1.0kb downstream 1000 false Scaffold147: 196223-197222 Capsella grandiflora
Cagra.0147s0051 2.0kb upstream 2.0kb upstream 5365 true Scaffold147: 197223-202587 Capsella grandiflora
Cagra.0147s0051 2.0kb upstream 2.0kb upstream 2000 false Scaffold147: 200588-202587 Capsella grandiflora
Cagra.0147s0051 2.0kb downstream 2.0kb downstream 5365 true Scaffold147: 195223-200587 Capsella grandiflora
Cagra.0147s0051 2.0kb downstream 2.0kb downstream 2000 false Scaffold147: 195223-197222 Capsella grandiflora
Cagra.0147s0051 5.0kb upstream 5.0kb upstream 8365 true Scaffold147: 197223-205587 Capsella grandiflora
Cagra.0147s0051 5.0kb upstream 5.0kb upstream 5000 false Scaffold147: 200588-205587 Capsella grandiflora
Cagra.0147s0051 5.0kb downstream 5.0kb downstream 8365 true Scaffold147: 192223-200587 Capsella grandiflora
Cagra.0147s0051 5.0kb downstream 5.0kb downstream 5000 false Scaffold147: 192223-197222 Capsella grandiflora
Cagra.0147s0051 10.0kb upstream 10.0kb upstream 13365 true Scaffold147: 197223-210587 Capsella grandiflora
Cagra.0147s0051 10.0kb upstream 10.0kb upstream 10000 false Scaffold147: 200588-210587 Capsella grandiflora
Cagra.0147s0051 10.0kb downstream 10.0kb downstream 13365 true Scaffold147: 187223-200587 Capsella grandiflora
Cagra.0147s0051 10.0kb downstream 10.0kb downstream 10000 false Scaffold147: 187223-197222 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369164 5261 Brassicaceae View MSA
123839868 5264 Brassicales-Malvales View MSA
124349829 5266 SBM View MSA
124250518 5268 Malvidae View MSA
124067962 5270 Rosid View MSA
123747841 5271 Pentapetalae View MSA
122796951 5272 Eudicot View MSA
122046141 5273 Angiosperm View MSA
121351759 5274 Embryophyte View MSA
123382310 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain