Gene : Cagra.0133s0027 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31875:SF6 - PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4-RELATED Genomic Order:  27
Name:  ? Cagra.0133s0027 Secondary Identifier:  ? PAC:28899516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0027 0.5kb upstream 0.5kb upstream 2249 true Scaffold133: 103387-105635 Capsella grandiflora
Cagra.0133s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 103387-103886 Capsella grandiflora
Cagra.0133s0027 0.5kb downstream 0.5kb downstream 2249 true Scaffold133: 103887-106135 Capsella grandiflora
Cagra.0133s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 105636-106135 Capsella grandiflora
Cagra.0133s0027 1.0kb upstream 1.0kb upstream 2749 true Scaffold133: 102887-105635 Capsella grandiflora
Cagra.0133s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 102887-103886 Capsella grandiflora
Cagra.0133s0027 1.0kb downstream 1.0kb downstream 2749 true Scaffold133: 103887-106635 Capsella grandiflora
Cagra.0133s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 105636-106635 Capsella grandiflora
Cagra.0133s0027 2.0kb upstream 2.0kb upstream 3749 true Scaffold133: 101887-105635 Capsella grandiflora
Cagra.0133s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 101887-103886 Capsella grandiflora
Cagra.0133s0027 2.0kb downstream 2.0kb downstream 3749 true Scaffold133: 103887-107635 Capsella grandiflora
Cagra.0133s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 105636-107635 Capsella grandiflora
Cagra.0133s0027 5.0kb upstream 5.0kb upstream 6749 true Scaffold133: 98887-105635 Capsella grandiflora
Cagra.0133s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 98887-103886 Capsella grandiflora
Cagra.0133s0027 5.0kb downstream 5.0kb downstream 6749 true Scaffold133: 103887-110635 Capsella grandiflora
Cagra.0133s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 105636-110635 Capsella grandiflora
Cagra.0133s0027 10.0kb upstream 10.0kb upstream 11749 true Scaffold133: 93887-105635 Capsella grandiflora
Cagra.0133s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 93887-103886 Capsella grandiflora
Cagra.0133s0027 10.0kb downstream 10.0kb downstream 11749 true Scaffold133: 103887-115635 Capsella grandiflora
Cagra.0133s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 105636-115635 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378074 5261 Brassicaceae View MSA
123827566 5264 Brassicales-Malvales View MSA
124350196 5266 SBM View MSA
124249174 5268 Malvidae View MSA
124071029 5270 Rosid View MSA
123742538 5271 Pentapetalae View MSA
122794267 5272 Eudicot View MSA
122043196 5273 Angiosperm View MSA
121347850 5274 Embryophyte View MSA
123380651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain