Gene : Cagra.0133s0035 C. grandiflora v1.1
Defline:  (1 of 1) 1.1.1.35//4.2.1.17//4.2.1.55//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA dehydratase / Crotonase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  35
Name:  ? Cagra.0133s0035 Secondary Identifier:  ? PAC:28899482
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ILEUDEG-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5136 Capsella grandiflora pathologic  
Cgrandiflora PWY-5137 Capsella grandiflora pathologic  
Cgrandiflora PWY-5138 Capsella grandiflora pathologic  
Cgrandiflora PWY-561 Capsella grandiflora pathologic  
Cgrandiflora PWY-6435 Capsella grandiflora pathologic  
Cgrandiflora PWY-6837 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-735 Capsella grandiflora pathologic  
Cgrandiflora PWY-7606 Capsella grandiflora pathologic  
Cgrandiflora VALDEG-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0035 0.5kb upstream 0.5kb upstream 5195 true Scaffold133: 129376-134570 Capsella grandiflora
Cagra.0133s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 129376-129875 Capsella grandiflora
Cagra.0133s0035 0.5kb downstream 0.5kb downstream 5195 true Scaffold133: 129876-135070 Capsella grandiflora
Cagra.0133s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 134571-135070 Capsella grandiflora
Cagra.0133s0035 1.0kb upstream 1.0kb upstream 5695 true Scaffold133: 128876-134570 Capsella grandiflora
Cagra.0133s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 128876-129875 Capsella grandiflora
Cagra.0133s0035 1.0kb downstream 1.0kb downstream 5695 true Scaffold133: 129876-135570 Capsella grandiflora
Cagra.0133s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 134571-135570 Capsella grandiflora
Cagra.0133s0035 2.0kb upstream 2.0kb upstream 6695 true Scaffold133: 127876-134570 Capsella grandiflora
Cagra.0133s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 127876-129875 Capsella grandiflora
Cagra.0133s0035 2.0kb downstream 2.0kb downstream 6695 true Scaffold133: 129876-136570 Capsella grandiflora
Cagra.0133s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 134571-136570 Capsella grandiflora
Cagra.0133s0035 5.0kb upstream 5.0kb upstream 9695 true Scaffold133: 124876-134570 Capsella grandiflora
Cagra.0133s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 124876-129875 Capsella grandiflora
Cagra.0133s0035 5.0kb downstream 5.0kb downstream 9695 true Scaffold133: 129876-139570 Capsella grandiflora
Cagra.0133s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 134571-139570 Capsella grandiflora
Cagra.0133s0035 10.0kb upstream 10.0kb upstream 14695 true Scaffold133: 119876-134570 Capsella grandiflora
Cagra.0133s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 119876-129875 Capsella grandiflora
Cagra.0133s0035 10.0kb downstream 10.0kb downstream 14695 true Scaffold133: 129876-144570 Capsella grandiflora
Cagra.0133s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 134571-144570 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378550 5261 Brassicaceae View MSA
123830316 5264 Brassicales-Malvales View MSA
124341284 5266 SBM View MSA
124238455 5268 Malvidae View MSA
124061936 5270 Rosid View MSA
123740661 5271 Pentapetalae View MSA
122785876 5272 Eudicot View MSA
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain