Gene : Cagra.0133s0034 C. grandiflora v1.1
Defline:  (1 of 1) 2.3.1.168 - Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase / Dihydrolipoyl transacylase Genomic Order:  34
Name:  ? Cagra.0133s0034 Secondary Identifier:  ? PAC:28899432
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5046 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0034 0.5kb upstream 0.5kb upstream 2922 true Scaffold133: 124846-127767 Capsella grandiflora
Cagra.0133s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 127268-127767 Capsella grandiflora
Cagra.0133s0034 0.5kb downstream 0.5kb downstream 2922 true Scaffold133: 124346-127267 Capsella grandiflora
Cagra.0133s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 124346-124845 Capsella grandiflora
Cagra.0133s0034 1.0kb upstream 1.0kb upstream 3422 true Scaffold133: 124846-128267 Capsella grandiflora
Cagra.0133s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 127268-128267 Capsella grandiflora
Cagra.0133s0034 1.0kb downstream 1.0kb downstream 3422 true Scaffold133: 123846-127267 Capsella grandiflora
Cagra.0133s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 123846-124845 Capsella grandiflora
Cagra.0133s0034 2.0kb upstream 2.0kb upstream 4422 true Scaffold133: 124846-129267 Capsella grandiflora
Cagra.0133s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 127268-129267 Capsella grandiflora
Cagra.0133s0034 2.0kb downstream 2.0kb downstream 4422 true Scaffold133: 122846-127267 Capsella grandiflora
Cagra.0133s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 122846-124845 Capsella grandiflora
Cagra.0133s0034 5.0kb upstream 5.0kb upstream 7422 true Scaffold133: 124846-132267 Capsella grandiflora
Cagra.0133s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 127268-132267 Capsella grandiflora
Cagra.0133s0034 5.0kb downstream 5.0kb downstream 7422 true Scaffold133: 119846-127267 Capsella grandiflora
Cagra.0133s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 119846-124845 Capsella grandiflora
Cagra.0133s0034 10.0kb upstream 10.0kb upstream 12422 true Scaffold133: 124846-137267 Capsella grandiflora
Cagra.0133s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 127268-137267 Capsella grandiflora
Cagra.0133s0034 10.0kb downstream 10.0kb downstream 12422 true Scaffold133: 114846-127267 Capsella grandiflora
Cagra.0133s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 114846-124845 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332498 5261 Brassicaceae Singleton cluster - no MSA
123773562 5264 Brassicales-Malvales Singleton cluster - no MSA
124272040 5266 SBM Singleton cluster - no MSA
124249806 5268 Malvidae View MSA
124066598 5270 Rosid View MSA
123740917 5271 Pentapetalae View MSA
122788338 5272 Eudicot View MSA
122046167 5273 Angiosperm View MSA
121344663 5274 Embryophyte View MSA
123425518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain