Gene : Cagra.0133s0048 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13516:SF3 - ALBA DNA/RNA-BINDING PROTEIN Genomic Order:  48
Name:  ? Cagra.0133s0048 Secondary Identifier:  ? PAC:28899474
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0048 0.5kb upstream 0.5kb upstream 3528 true Scaffold133: 189578-193105 Capsella grandiflora
Cagra.0133s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 192606-193105 Capsella grandiflora
Cagra.0133s0048 0.5kb downstream 0.5kb downstream 3528 true Scaffold133: 189078-192605 Capsella grandiflora
Cagra.0133s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 189078-189577 Capsella grandiflora
Cagra.0133s0048 1.0kb upstream 1.0kb upstream 4028 true Scaffold133: 189578-193605 Capsella grandiflora
Cagra.0133s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 192606-193605 Capsella grandiflora
Cagra.0133s0048 1.0kb downstream 1.0kb downstream 4028 true Scaffold133: 188578-192605 Capsella grandiflora
Cagra.0133s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 188578-189577 Capsella grandiflora
Cagra.0133s0048 2.0kb upstream 2.0kb upstream 5028 true Scaffold133: 189578-194605 Capsella grandiflora
Cagra.0133s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 192606-194605 Capsella grandiflora
Cagra.0133s0048 2.0kb downstream 2.0kb downstream 5028 true Scaffold133: 187578-192605 Capsella grandiflora
Cagra.0133s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 187578-189577 Capsella grandiflora
Cagra.0133s0048 5.0kb upstream 5.0kb upstream 8028 true Scaffold133: 189578-197605 Capsella grandiflora
Cagra.0133s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 192606-197605 Capsella grandiflora
Cagra.0133s0048 5.0kb downstream 5.0kb downstream 8028 true Scaffold133: 184578-192605 Capsella grandiflora
Cagra.0133s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 184578-189577 Capsella grandiflora
Cagra.0133s0048 10.0kb upstream 10.0kb upstream 13028 true Scaffold133: 189578-202605 Capsella grandiflora
Cagra.0133s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 192606-202605 Capsella grandiflora
Cagra.0133s0048 10.0kb downstream 10.0kb downstream 13028 true Scaffold133: 179578-192605 Capsella grandiflora
Cagra.0133s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 179578-189577 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372684 5261 Brassicaceae View MSA
123800409 5264 Brassicales-Malvales View MSA
124297824 5266 SBM View MSA
124246988 5268 Malvidae View MSA
124070667 5270 Rosid View MSA
123752020 5271 Pentapetalae View MSA
122793375 5272 Eudicot View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain