Gene : Cagra.0133s0055 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13803//PTHR13803:SF11 - SEC24-RELATED PROTEIN Genomic Order:  55
Name:  ? Cagra.0133s0055 Secondary Identifier:  ? PAC:28899514
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0055 0.5kb upstream 0.5kb upstream 6227 true Scaffold133: 209852-216078 Capsella grandiflora
Cagra.0133s0055 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 215579-216078 Capsella grandiflora
Cagra.0133s0055 0.5kb downstream 0.5kb downstream 6227 true Scaffold133: 209352-215578 Capsella grandiflora
Cagra.0133s0055 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 209352-209851 Capsella grandiflora
Cagra.0133s0055 1.0kb upstream 1.0kb upstream 6727 true Scaffold133: 209852-216578 Capsella grandiflora
Cagra.0133s0055 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 215579-216578 Capsella grandiflora
Cagra.0133s0055 1.0kb downstream 1.0kb downstream 6727 true Scaffold133: 208852-215578 Capsella grandiflora
Cagra.0133s0055 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 208852-209851 Capsella grandiflora
Cagra.0133s0055 2.0kb upstream 2.0kb upstream 7727 true Scaffold133: 209852-217578 Capsella grandiflora
Cagra.0133s0055 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 215579-217578 Capsella grandiflora
Cagra.0133s0055 2.0kb downstream 2.0kb downstream 7727 true Scaffold133: 207852-215578 Capsella grandiflora
Cagra.0133s0055 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 207852-209851 Capsella grandiflora
Cagra.0133s0055 5.0kb upstream 5.0kb upstream 10727 true Scaffold133: 209852-220578 Capsella grandiflora
Cagra.0133s0055 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 215579-220578 Capsella grandiflora
Cagra.0133s0055 5.0kb downstream 5.0kb downstream 10727 true Scaffold133: 204852-215578 Capsella grandiflora
Cagra.0133s0055 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 204852-209851 Capsella grandiflora
Cagra.0133s0055 10.0kb upstream 10.0kb upstream 15727 true Scaffold133: 209852-225578 Capsella grandiflora
Cagra.0133s0055 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 215579-225578 Capsella grandiflora
Cagra.0133s0055 10.0kb downstream 10.0kb downstream 15727 true Scaffold133: 199852-215578 Capsella grandiflora
Cagra.0133s0055 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 199852-209851 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364898 5261 Brassicaceae View MSA
123828346 5264 Brassicales-Malvales View MSA
124345547 5266 SBM View MSA
124250701 5268 Malvidae View MSA
124061361 5270 Rosid View MSA
123740162 5271 Pentapetalae View MSA
122790421 5272 Eudicot View MSA
122044052 5273 Angiosperm View MSA
121345346 5274 Embryophyte View MSA
123423840 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain