Gene : Cagra.0133s0059 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12959 - GPI TRANSAMIDASE COMPONENT PIG-T-RELATED Genomic Order:  59
Name:  ? Cagra.0133s0059 Secondary Identifier:  ? PAC:28899454
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0059 0.5kb upstream 0.5kb upstream 3679 true Scaffold133: 222991-226669 Capsella grandiflora
Cagra.0133s0059 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 222991-223490 Capsella grandiflora
Cagra.0133s0059 0.5kb downstream 0.5kb downstream 3679 true Scaffold133: 223491-227169 Capsella grandiflora
Cagra.0133s0059 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 226670-227169 Capsella grandiflora
Cagra.0133s0059 1.0kb upstream 1.0kb upstream 4179 true Scaffold133: 222491-226669 Capsella grandiflora
Cagra.0133s0059 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 222491-223490 Capsella grandiflora
Cagra.0133s0059 1.0kb downstream 1.0kb downstream 4179 true Scaffold133: 223491-227669 Capsella grandiflora
Cagra.0133s0059 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 226670-227669 Capsella grandiflora
Cagra.0133s0059 2.0kb upstream 2.0kb upstream 5179 true Scaffold133: 221491-226669 Capsella grandiflora
Cagra.0133s0059 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 221491-223490 Capsella grandiflora
Cagra.0133s0059 2.0kb downstream 2.0kb downstream 5179 true Scaffold133: 223491-228669 Capsella grandiflora
Cagra.0133s0059 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 226670-228669 Capsella grandiflora
Cagra.0133s0059 5.0kb upstream 5.0kb upstream 8179 true Scaffold133: 218491-226669 Capsella grandiflora
Cagra.0133s0059 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 218491-223490 Capsella grandiflora
Cagra.0133s0059 5.0kb downstream 5.0kb downstream 8179 true Scaffold133: 223491-231669 Capsella grandiflora
Cagra.0133s0059 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 226670-231669 Capsella grandiflora
Cagra.0133s0059 10.0kb upstream 10.0kb upstream 13179 true Scaffold133: 213491-226669 Capsella grandiflora
Cagra.0133s0059 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 213491-223490 Capsella grandiflora
Cagra.0133s0059 10.0kb downstream 10.0kb downstream 13179 true Scaffold133: 223491-236669 Capsella grandiflora
Cagra.0133s0059 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 226670-236669 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362235 5261 Brassicaceae View MSA
123830847 5264 Brassicales-Malvales View MSA
124342042 5266 SBM View MSA
124243385 5268 Malvidae View MSA
124065019 5270 Rosid View MSA
123738275 5271 Pentapetalae View MSA
122788314 5272 Eudicot View MSA
122043448 5273 Angiosperm View MSA
121344802 5274 Embryophyte View MSA
123425263 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain