Gene : Cagra.0133s0096 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12866:SF5 - UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10 Genomic Order:  96
Name:  ? Cagra.0133s0096 Secondary Identifier:  ? PAC:28899539
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0096 0.5kb upstream 0.5kb upstream 2251 true Scaffold133: 360755-363005 Capsella grandiflora
Cagra.0133s0096 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 362506-363005 Capsella grandiflora
Cagra.0133s0096 0.5kb downstream 0.5kb downstream 2251 true Scaffold133: 360255-362505 Capsella grandiflora
Cagra.0133s0096 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 360255-360754 Capsella grandiflora
Cagra.0133s0096 1.0kb upstream 1.0kb upstream 2751 true Scaffold133: 360755-363505 Capsella grandiflora
Cagra.0133s0096 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 362506-363505 Capsella grandiflora
Cagra.0133s0096 1.0kb downstream 1.0kb downstream 2751 true Scaffold133: 359755-362505 Capsella grandiflora
Cagra.0133s0096 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 359755-360754 Capsella grandiflora
Cagra.0133s0096 2.0kb upstream 2.0kb upstream 3751 true Scaffold133: 360755-364505 Capsella grandiflora
Cagra.0133s0096 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 362506-364505 Capsella grandiflora
Cagra.0133s0096 2.0kb downstream 2.0kb downstream 3751 true Scaffold133: 358755-362505 Capsella grandiflora
Cagra.0133s0096 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 358755-360754 Capsella grandiflora
Cagra.0133s0096 5.0kb upstream 5.0kb upstream 6751 true Scaffold133: 360755-367505 Capsella grandiflora
Cagra.0133s0096 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 362506-367505 Capsella grandiflora
Cagra.0133s0096 5.0kb downstream 5.0kb downstream 6751 true Scaffold133: 355755-362505 Capsella grandiflora
Cagra.0133s0096 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 355755-360754 Capsella grandiflora
Cagra.0133s0096 10.0kb upstream 10.0kb upstream 11751 true Scaffold133: 360755-372505 Capsella grandiflora
Cagra.0133s0096 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 362506-372505 Capsella grandiflora
Cagra.0133s0096 10.0kb downstream 10.0kb downstream 11751 true Scaffold133: 350755-362505 Capsella grandiflora
Cagra.0133s0096 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 350755-360754 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364159 5261 Brassicaceae View MSA
123834754 5264 Brassicales-Malvales View MSA
124337251 5266 SBM View MSA
124239748 5268 Malvidae View MSA
124065951 5270 Rosid View MSA
123738819 5271 Pentapetalae View MSA
122789693 5272 Eudicot View MSA
122045044 5273 Angiosperm View MSA
121344822 5274 Embryophyte View MSA
123380107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain