Gene : Cagra.0114s0042 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11200:SF136 - PHOSPHOINOSITIDE PHOSPHATASE SAC1 Genomic Order:  42
Name:  ? Cagra.0114s0042 Secondary Identifier:  ? PAC:28915784
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0114s0042 0.5kb upstream 0.5kb upstream 5820 true Scaffold114: 160462-166281 Capsella grandiflora
Cagra.0114s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold114: 160462-160961 Capsella grandiflora
Cagra.0114s0042 0.5kb downstream 0.5kb downstream 5820 true Scaffold114: 160962-166781 Capsella grandiflora
Cagra.0114s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold114: 166282-166781 Capsella grandiflora
Cagra.0114s0042 1.0kb upstream 1.0kb upstream 6320 true Scaffold114: 159962-166281 Capsella grandiflora
Cagra.0114s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold114: 159962-160961 Capsella grandiflora
Cagra.0114s0042 1.0kb downstream 1.0kb downstream 6320 true Scaffold114: 160962-167281 Capsella grandiflora
Cagra.0114s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold114: 166282-167281 Capsella grandiflora
Cagra.0114s0042 2.0kb upstream 2.0kb upstream 7320 true Scaffold114: 158962-166281 Capsella grandiflora
Cagra.0114s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold114: 158962-160961 Capsella grandiflora
Cagra.0114s0042 2.0kb downstream 2.0kb downstream 7320 true Scaffold114: 160962-168281 Capsella grandiflora
Cagra.0114s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold114: 166282-168281 Capsella grandiflora
Cagra.0114s0042 5.0kb upstream 5.0kb upstream 10320 true Scaffold114: 155962-166281 Capsella grandiflora
Cagra.0114s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold114: 155962-160961 Capsella grandiflora
Cagra.0114s0042 5.0kb downstream 5.0kb downstream 10320 true Scaffold114: 160962-171281 Capsella grandiflora
Cagra.0114s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold114: 166282-171281 Capsella grandiflora
Cagra.0114s0042 10.0kb upstream 10.0kb upstream 15320 true Scaffold114: 150962-166281 Capsella grandiflora
Cagra.0114s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold114: 150962-160961 Capsella grandiflora
Cagra.0114s0042 10.0kb downstream 10.0kb downstream 15320 true Scaffold114: 160962-176281 Capsella grandiflora
Cagra.0114s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold114: 166282-176281 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371533 5261 Brassicaceae View MSA
123832980 5264 Brassicales-Malvales View MSA
124343186 5266 SBM View MSA
124250934 5268 Malvidae View MSA
124074413 5270 Rosid View MSA
123737573 5271 Pentapetalae View MSA
122791865 5272 Eudicot View MSA
122047437 5273 Angiosperm View MSA
121350498 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain