Gene : Cagra.0114s0049 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23324:SF67 - PATELLIN-1-RELATED Genomic Order:  49
Name:  ? Cagra.0114s0049 Secondary Identifier:  ? PAC:28915740
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0114s0049 0.5kb upstream 0.5kb upstream 3238 true Scaffold114: 192469-195706 Capsella grandiflora
Cagra.0114s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold114: 192469-192968 Capsella grandiflora
Cagra.0114s0049 0.5kb downstream 0.5kb downstream 3238 true Scaffold114: 192969-196206 Capsella grandiflora
Cagra.0114s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold114: 195707-196206 Capsella grandiflora
Cagra.0114s0049 1.0kb upstream 1.0kb upstream 3738 true Scaffold114: 191969-195706 Capsella grandiflora
Cagra.0114s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold114: 191969-192968 Capsella grandiflora
Cagra.0114s0049 1.0kb downstream 1.0kb downstream 3738 true Scaffold114: 192969-196706 Capsella grandiflora
Cagra.0114s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold114: 195707-196706 Capsella grandiflora
Cagra.0114s0049 2.0kb upstream 2.0kb upstream 4738 true Scaffold114: 190969-195706 Capsella grandiflora
Cagra.0114s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold114: 190969-192968 Capsella grandiflora
Cagra.0114s0049 2.0kb downstream 2.0kb downstream 4738 true Scaffold114: 192969-197706 Capsella grandiflora
Cagra.0114s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold114: 195707-197706 Capsella grandiflora
Cagra.0114s0049 5.0kb upstream 5.0kb upstream 7738 true Scaffold114: 187969-195706 Capsella grandiflora
Cagra.0114s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold114: 187969-192968 Capsella grandiflora
Cagra.0114s0049 5.0kb downstream 5.0kb downstream 7738 true Scaffold114: 192969-200706 Capsella grandiflora
Cagra.0114s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold114: 195707-200706 Capsella grandiflora
Cagra.0114s0049 10.0kb upstream 10.0kb upstream 12738 true Scaffold114: 182969-195706 Capsella grandiflora
Cagra.0114s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold114: 182969-192968 Capsella grandiflora
Cagra.0114s0049 10.0kb downstream 10.0kb downstream 12738 true Scaffold114: 192969-205706 Capsella grandiflora
Cagra.0114s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold114: 195707-205706 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363699 5261 Brassicaceae View MSA
123837677 5264 Brassicales-Malvales View MSA
124345949 5266 SBM View MSA
124253290 5268 Malvidae View MSA
124069851 5270 Rosid View MSA
123749558 5271 Pentapetalae View MSA
122796481 5272 Eudicot View MSA
122048382 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121350193 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain