Gene : Cagra.0114s0048 C. grandiflora v1.1
Defline:  (1 of 6) PTHR11654:SF94 - PROTEIN NRT1/ PTR FAMILY 5.10-RELATED Genomic Order:  48
Name:  ? Cagra.0114s0048 Secondary Identifier:  ? PAC:28915743
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0114s0048 0.5kb upstream 0.5kb upstream 2161 true Scaffold114: 187495-189655 Capsella grandiflora
Cagra.0114s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold114: 189156-189655 Capsella grandiflora
Cagra.0114s0048 0.5kb downstream 0.5kb downstream 2161 true Scaffold114: 186995-189155 Capsella grandiflora
Cagra.0114s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold114: 186995-187494 Capsella grandiflora
Cagra.0114s0048 1.0kb upstream 1.0kb upstream 2661 true Scaffold114: 187495-190155 Capsella grandiflora
Cagra.0114s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold114: 189156-190155 Capsella grandiflora
Cagra.0114s0048 1.0kb downstream 1.0kb downstream 2661 true Scaffold114: 186495-189155 Capsella grandiflora
Cagra.0114s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold114: 186495-187494 Capsella grandiflora
Cagra.0114s0048 2.0kb upstream 2.0kb upstream 3661 true Scaffold114: 187495-191155 Capsella grandiflora
Cagra.0114s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold114: 189156-191155 Capsella grandiflora
Cagra.0114s0048 2.0kb downstream 2.0kb downstream 3661 true Scaffold114: 185495-189155 Capsella grandiflora
Cagra.0114s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold114: 185495-187494 Capsella grandiflora
Cagra.0114s0048 5.0kb upstream 5.0kb upstream 6661 true Scaffold114: 187495-194155 Capsella grandiflora
Cagra.0114s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold114: 189156-194155 Capsella grandiflora
Cagra.0114s0048 5.0kb downstream 5.0kb downstream 6661 true Scaffold114: 182495-189155 Capsella grandiflora
Cagra.0114s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold114: 182495-187494 Capsella grandiflora
Cagra.0114s0048 10.0kb upstream 10.0kb upstream 11661 true Scaffold114: 187495-199155 Capsella grandiflora
Cagra.0114s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold114: 189156-199155 Capsella grandiflora
Cagra.0114s0048 10.0kb downstream 10.0kb downstream 11661 true Scaffold114: 177495-189155 Capsella grandiflora
Cagra.0114s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold114: 177495-187494 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363409 5261 Brassicaceae View MSA
123833277 5264 Brassicales-Malvales View MSA
124339663 5266 SBM View MSA
124250409 5268 Malvidae View MSA
124072742 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain