Gene : Cagra.0114s0058 C. grandiflora v1.1
Defline:  (1 of 10) 1.1.1.1 - Alcohol dehydrogenase / Aldehyde reductase Genomic Order:  58
Name:  ? Cagra.0114s0058 Secondary Identifier:  ? PAC:28915813
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5486 Capsella grandiflora pathologic  
Cgrandiflora PWY-5751 Capsella grandiflora pathologic  
Cgrandiflora PWY-6333 Capsella grandiflora pathologic  
Cgrandiflora PWY66-21 Capsella grandiflora pathologic  
Cgrandiflora PWY66-389 Capsella grandiflora pathologic  
Cgrandiflora PWY-6802 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0114s0058 0.5kb upstream 0.5kb upstream 1377 true Scaffold114: 229216-230592 Capsella grandiflora
Cagra.0114s0058 0.5kb upstream 0.5kb upstream 500 false Scaffold114: 230093-230592 Capsella grandiflora
Cagra.0114s0058 0.5kb downstream 0.5kb downstream 1377 true Scaffold114: 228716-230092 Capsella grandiflora
Cagra.0114s0058 0.5kb downstream 0.5kb downstream 500 false Scaffold114: 228716-229215 Capsella grandiflora
Cagra.0114s0058 1.0kb upstream 1.0kb upstream 1877 true Scaffold114: 229216-231092 Capsella grandiflora
Cagra.0114s0058 1.0kb upstream 1.0kb upstream 1000 false Scaffold114: 230093-231092 Capsella grandiflora
Cagra.0114s0058 1.0kb downstream 1.0kb downstream 1877 true Scaffold114: 228216-230092 Capsella grandiflora
Cagra.0114s0058 1.0kb downstream 1.0kb downstream 1000 false Scaffold114: 228216-229215 Capsella grandiflora
Cagra.0114s0058 2.0kb upstream 2.0kb upstream 2877 true Scaffold114: 229216-232092 Capsella grandiflora
Cagra.0114s0058 2.0kb upstream 2.0kb upstream 2000 false Scaffold114: 230093-232092 Capsella grandiflora
Cagra.0114s0058 2.0kb downstream 2.0kb downstream 2877 true Scaffold114: 227216-230092 Capsella grandiflora
Cagra.0114s0058 2.0kb downstream 2.0kb downstream 2000 false Scaffold114: 227216-229215 Capsella grandiflora
Cagra.0114s0058 5.0kb upstream 5.0kb upstream 5877 true Scaffold114: 229216-235092 Capsella grandiflora
Cagra.0114s0058 5.0kb upstream 5.0kb upstream 5000 false Scaffold114: 230093-235092 Capsella grandiflora
Cagra.0114s0058 5.0kb downstream 5.0kb downstream 5877 true Scaffold114: 224216-230092 Capsella grandiflora
Cagra.0114s0058 5.0kb downstream 5.0kb downstream 5000 false Scaffold114: 224216-229215 Capsella grandiflora
Cagra.0114s0058 10.0kb upstream 10.0kb upstream 10877 true Scaffold114: 229216-240092 Capsella grandiflora
Cagra.0114s0058 10.0kb upstream 10.0kb upstream 10000 false Scaffold114: 230093-240092 Capsella grandiflora
Cagra.0114s0058 10.0kb downstream 10.0kb downstream 10877 true Scaffold114: 219216-230092 Capsella grandiflora
Cagra.0114s0058 10.0kb downstream 10.0kb downstream 10000 false Scaffold114: 219216-229215 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332346 5261 Brassicaceae Singleton cluster - no MSA
123773424 5264 Brassicales-Malvales Singleton cluster - no MSA
124271909 5266 SBM Singleton cluster - no MSA
124249969 5268 Malvidae View MSA
124074336 5270 Rosid View MSA
123753594 5271 Pentapetalae View MSA
122797386 5272 Eudicot View MSA
122050713 5273 Angiosperm View MSA
121350624 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain