Gene : Cagra.0117s0008 C. grandiflora v1.1
Defline:  (1 of 2) KOG2014 - SMT3/SUMO-activating complex, AOS1/RAD31 component Genomic Order:  8
Name:  ? Cagra.0117s0008 Secondary Identifier:  ? PAC:28919145
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0117s0008 0.5kb upstream 0.5kb upstream 2793 true Scaffold117: 29366-32158 Capsella grandiflora
Cagra.0117s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold117: 29366-29865 Capsella grandiflora
Cagra.0117s0008 0.5kb downstream 0.5kb downstream 2793 true Scaffold117: 29866-32658 Capsella grandiflora
Cagra.0117s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold117: 32159-32658 Capsella grandiflora
Cagra.0117s0008 1.0kb upstream 1.0kb upstream 3293 true Scaffold117: 28866-32158 Capsella grandiflora
Cagra.0117s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold117: 28866-29865 Capsella grandiflora
Cagra.0117s0008 1.0kb downstream 1.0kb downstream 3293 true Scaffold117: 29866-33158 Capsella grandiflora
Cagra.0117s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold117: 32159-33158 Capsella grandiflora
Cagra.0117s0008 2.0kb upstream 2.0kb upstream 4293 true Scaffold117: 27866-32158 Capsella grandiflora
Cagra.0117s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold117: 27866-29865 Capsella grandiflora
Cagra.0117s0008 2.0kb downstream 2.0kb downstream 4293 true Scaffold117: 29866-34158 Capsella grandiflora
Cagra.0117s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold117: 32159-34158 Capsella grandiflora
Cagra.0117s0008 5.0kb upstream 5.0kb upstream 7293 true Scaffold117: 24866-32158 Capsella grandiflora
Cagra.0117s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold117: 24866-29865 Capsella grandiflora
Cagra.0117s0008 5.0kb downstream 5.0kb downstream 7293 true Scaffold117: 29866-37158 Capsella grandiflora
Cagra.0117s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold117: 32159-37158 Capsella grandiflora
Cagra.0117s0008 10.0kb upstream 10.0kb upstream 12293 true Scaffold117: 19866-32158 Capsella grandiflora
Cagra.0117s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold117: 19866-29865 Capsella grandiflora
Cagra.0117s0008 10.0kb downstream 10.0kb downstream 12293 true Scaffold117: 29866-42158 Capsella grandiflora
Cagra.0117s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold117: 32159-42158 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041218 5273 Angiosperm View MSA
122343356 5261 Brassicaceae View MSA
123838519 5264 Brassicales-Malvales View MSA
124338287 5266 SBM View MSA
124242935 5268 Malvidae View MSA
124063789 5270 Rosid View MSA
123737552 5271 Pentapetalae View MSA
122790997 5272 Eudicot View MSA
121348552 5274 Embryophyte View MSA
123424130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain