Gene : Cagra.0117s0007 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31251:SF20 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 13A-RELATED Genomic Order:  7
Name:  ? Cagra.0117s0007 Secondary Identifier:  ? PAC:28919137
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0117s0007 0.5kb upstream 0.5kb upstream 2198 true Scaffold117: 25613-27810 Capsella grandiflora
Cagra.0117s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold117: 27311-27810 Capsella grandiflora
Cagra.0117s0007 0.5kb downstream 0.5kb downstream 2198 true Scaffold117: 25113-27310 Capsella grandiflora
Cagra.0117s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold117: 25113-25612 Capsella grandiflora
Cagra.0117s0007 1.0kb upstream 1.0kb upstream 2698 true Scaffold117: 25613-28310 Capsella grandiflora
Cagra.0117s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold117: 27311-28310 Capsella grandiflora
Cagra.0117s0007 1.0kb downstream 1.0kb downstream 2698 true Scaffold117: 24613-27310 Capsella grandiflora
Cagra.0117s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold117: 24613-25612 Capsella grandiflora
Cagra.0117s0007 2.0kb upstream 2.0kb upstream 3698 true Scaffold117: 25613-29310 Capsella grandiflora
Cagra.0117s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold117: 27311-29310 Capsella grandiflora
Cagra.0117s0007 2.0kb downstream 2.0kb downstream 3698 true Scaffold117: 23613-27310 Capsella grandiflora
Cagra.0117s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold117: 23613-25612 Capsella grandiflora
Cagra.0117s0007 5.0kb upstream 5.0kb upstream 6698 true Scaffold117: 25613-32310 Capsella grandiflora
Cagra.0117s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold117: 27311-32310 Capsella grandiflora
Cagra.0117s0007 5.0kb downstream 5.0kb downstream 6698 true Scaffold117: 20613-27310 Capsella grandiflora
Cagra.0117s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold117: 20613-25612 Capsella grandiflora
Cagra.0117s0007 10.0kb upstream 10.0kb upstream 11698 true Scaffold117: 25613-37310 Capsella grandiflora
Cagra.0117s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold117: 27311-37310 Capsella grandiflora
Cagra.0117s0007 10.0kb downstream 10.0kb downstream 11698 true Scaffold117: 15613-27310 Capsella grandiflora
Cagra.0117s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold117: 15613-25612 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367645 5261 Brassicaceae View MSA
123834528 5264 Brassicales-Malvales View MSA
124339898 5266 SBM View MSA
124246215 5268 Malvidae View MSA
124071884 5270 Rosid View MSA
123752325 5271 Pentapetalae View MSA
122795767 5272 Eudicot View MSA
122050333 5273 Angiosperm View MSA
123428908 5275 Viridiplantae View MSA
121351727 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain