Gene : Cagra.0117s0018 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10791:SF65 - BIDIRECTIONAL SUGAR TRANSPORTER SWEET11-RELATED Genomic Order:  18
Name:  ? Cagra.0117s0018 Secondary Identifier:  ? PAC:28919138
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0117s0018 0.5kb upstream 0.5kb upstream 2371 true Scaffold117: 85782-88152 Capsella grandiflora
Cagra.0117s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold117: 87653-88152 Capsella grandiflora
Cagra.0117s0018 0.5kb downstream 0.5kb downstream 2371 true Scaffold117: 85282-87652 Capsella grandiflora
Cagra.0117s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold117: 85282-85781 Capsella grandiflora
Cagra.0117s0018 1.0kb upstream 1.0kb upstream 2871 true Scaffold117: 85782-88652 Capsella grandiflora
Cagra.0117s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold117: 87653-88652 Capsella grandiflora
Cagra.0117s0018 1.0kb downstream 1.0kb downstream 2871 true Scaffold117: 84782-87652 Capsella grandiflora
Cagra.0117s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold117: 84782-85781 Capsella grandiflora
Cagra.0117s0018 2.0kb upstream 2.0kb upstream 3871 true Scaffold117: 85782-89652 Capsella grandiflora
Cagra.0117s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold117: 87653-89652 Capsella grandiflora
Cagra.0117s0018 2.0kb downstream 2.0kb downstream 3871 true Scaffold117: 83782-87652 Capsella grandiflora
Cagra.0117s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold117: 83782-85781 Capsella grandiflora
Cagra.0117s0018 5.0kb upstream 5.0kb upstream 5951 true Scaffold117: 85782-91732 Capsella grandiflora
Cagra.0117s0018 5.0kb upstream 5.0kb upstream 4080 false Scaffold117: 87653-91732 Capsella grandiflora
Cagra.0117s0018 5.0kb downstream 5.0kb downstream 6871 true Scaffold117: 80782-87652 Capsella grandiflora
Cagra.0117s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold117: 80782-85781 Capsella grandiflora
Cagra.0117s0018 10.0kb upstream 10.0kb upstream 5951 true Scaffold117: 85782-91732 Capsella grandiflora
Cagra.0117s0018 10.0kb upstream 10.0kb upstream 4080 false Scaffold117: 87653-91732 Capsella grandiflora
Cagra.0117s0018 10.0kb downstream 10.0kb downstream 11871 true Scaffold117: 75782-87652 Capsella grandiflora
Cagra.0117s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold117: 75782-85781 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360989 5261 Brassicaceae View MSA
123836013 5264 Brassicales-Malvales View MSA
124322123 5266 SBM View MSA
124253102 5268 Malvidae View MSA
124071404 5270 Rosid View MSA
123751761 5271 Pentapetalae View MSA
122795579 5272 Eudicot View MSA
122043029 5273 Angiosperm View MSA
121310066 5274 Embryophyte View MSA
123428840 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain