Gene : Cagra.0123s0001 C. grandiflora v1.1
Defline:  (1 of 5) PF07172 - Glycine rich protein family (GRP) Genomic Order:  1
Name:  ? Cagra.0123s0001 Secondary Identifier:  ? PAC:28896431
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0123s0001 0.5kb upstream 0.5kb upstream 1291 true Scaffold123: 1905-3195 Capsella grandiflora
Cagra.0123s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold123: 2696-3195 Capsella grandiflora
Cagra.0123s0001 0.5kb downstream 0.5kb downstream 1291 true Scaffold123: 1405-2695 Capsella grandiflora
Cagra.0123s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold123: 1405-1904 Capsella grandiflora
Cagra.0123s0001 1.0kb upstream 1.0kb upstream 1791 true Scaffold123: 1905-3695 Capsella grandiflora
Cagra.0123s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold123: 2696-3695 Capsella grandiflora
Cagra.0123s0001 1.0kb downstream 1.0kb downstream 1791 true Scaffold123: 905-2695 Capsella grandiflora
Cagra.0123s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold123: 905-1904 Capsella grandiflora
Cagra.0123s0001 2.0kb upstream 2.0kb upstream 2791 true Scaffold123: 1905-4695 Capsella grandiflora
Cagra.0123s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold123: 2696-4695 Capsella grandiflora
Cagra.0123s0001 2.0kb downstream 2.0kb downstream 2695 true Scaffold123: 1-2695 Capsella grandiflora
Cagra.0123s0001 2.0kb downstream 2.0kb downstream 1904 false Scaffold123: 1-1904 Capsella grandiflora
Cagra.0123s0001 5.0kb upstream 5.0kb upstream 5791 true Scaffold123: 1905-7695 Capsella grandiflora
Cagra.0123s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold123: 2696-7695 Capsella grandiflora
Cagra.0123s0001 5.0kb downstream 5.0kb downstream 2695 true Scaffold123: 1-2695 Capsella grandiflora
Cagra.0123s0001 5.0kb downstream 5.0kb downstream 1904 false Scaffold123: 1-1904 Capsella grandiflora
Cagra.0123s0001 10.0kb upstream 10.0kb upstream 10791 true Scaffold123: 1905-12695 Capsella grandiflora
Cagra.0123s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold123: 2696-12695 Capsella grandiflora
Cagra.0123s0001 10.0kb downstream 10.0kb downstream 2695 true Scaffold123: 1-2695 Capsella grandiflora
Cagra.0123s0001 10.0kb downstream 10.0kb downstream 1904 false Scaffold123: 1-1904 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376516 5261 Brassicaceae View MSA
123837571 5264 Brassicales-Malvales View MSA
124346130 5266 SBM View MSA
124249134 5268 Malvidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain