Gene : Cagra.0120s0003 C. grandiflora v1.1
Defline:  (1 of 20) PTHR31674:SF5 - B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 1-RELATED Genomic Order:  3
Name:  ? Cagra.0120s0003 Secondary Identifier:  ? PAC:28911874
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0120s0003 0.5kb upstream 0.5kb upstream 2740 true Scaffold120: 13454-16193 Capsella grandiflora
Cagra.0120s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold120: 13454-13953 Capsella grandiflora
Cagra.0120s0003 0.5kb downstream 0.5kb downstream 2740 true Scaffold120: 13954-16693 Capsella grandiflora
Cagra.0120s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold120: 16194-16693 Capsella grandiflora
Cagra.0120s0003 1.0kb upstream 1.0kb upstream 3240 true Scaffold120: 12954-16193 Capsella grandiflora
Cagra.0120s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold120: 12954-13953 Capsella grandiflora
Cagra.0120s0003 1.0kb downstream 1.0kb downstream 3240 true Scaffold120: 13954-17193 Capsella grandiflora
Cagra.0120s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold120: 16194-17193 Capsella grandiflora
Cagra.0120s0003 2.0kb upstream 2.0kb upstream 4240 true Scaffold120: 11954-16193 Capsella grandiflora
Cagra.0120s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold120: 11954-13953 Capsella grandiflora
Cagra.0120s0003 2.0kb downstream 2.0kb downstream 4240 true Scaffold120: 13954-18193 Capsella grandiflora
Cagra.0120s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold120: 16194-18193 Capsella grandiflora
Cagra.0120s0003 5.0kb upstream 5.0kb upstream 7240 true Scaffold120: 8954-16193 Capsella grandiflora
Cagra.0120s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold120: 8954-13953 Capsella grandiflora
Cagra.0120s0003 5.0kb downstream 5.0kb downstream 7240 true Scaffold120: 13954-21193 Capsella grandiflora
Cagra.0120s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold120: 16194-21193 Capsella grandiflora
Cagra.0120s0003 10.0kb upstream 10.0kb upstream 12240 true Scaffold120: 3954-16193 Capsella grandiflora
Cagra.0120s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold120: 3954-13953 Capsella grandiflora
Cagra.0120s0003 10.0kb downstream 10.0kb downstream 9616 true Scaffold120: 13954-23569 Capsella grandiflora
Cagra.0120s0003 10.0kb downstream 10.0kb downstream 7376 false Scaffold120: 16194-23569 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344028 5261 Brassicaceae View MSA
123784090 5264 Brassicales-Malvales View MSA
124282290 5266 SBM View MSA
124254086 5268 Malvidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain