Gene : Cagra.0133s0009 C. grandiflora v1.1
Defline:  (1 of 5) PTHR23257:SF485 - PAS DOMAIN-CONTAINING PROTEIN TYROSINE KINASE Genomic Order:  9
Name:  ? Cagra.0133s0009 Secondary Identifier:  ? PAC:28899489
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0009 0.5kb upstream 0.5kb upstream 5031 true Scaffold133: 34012-39042 Capsella grandiflora
Cagra.0133s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 38543-39042 Capsella grandiflora
Cagra.0133s0009 0.5kb downstream 0.5kb downstream 5031 true Scaffold133: 33512-38542 Capsella grandiflora
Cagra.0133s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 33512-34011 Capsella grandiflora
Cagra.0133s0009 1.0kb upstream 1.0kb upstream 5531 true Scaffold133: 34012-39542 Capsella grandiflora
Cagra.0133s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 38543-39542 Capsella grandiflora
Cagra.0133s0009 1.0kb downstream 1.0kb downstream 5531 true Scaffold133: 33012-38542 Capsella grandiflora
Cagra.0133s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 33012-34011 Capsella grandiflora
Cagra.0133s0009 2.0kb upstream 2.0kb upstream 6531 true Scaffold133: 34012-40542 Capsella grandiflora
Cagra.0133s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 38543-40542 Capsella grandiflora
Cagra.0133s0009 2.0kb downstream 2.0kb downstream 6531 true Scaffold133: 32012-38542 Capsella grandiflora
Cagra.0133s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 32012-34011 Capsella grandiflora
Cagra.0133s0009 5.0kb upstream 5.0kb upstream 9531 true Scaffold133: 34012-43542 Capsella grandiflora
Cagra.0133s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 38543-43542 Capsella grandiflora
Cagra.0133s0009 5.0kb downstream 5.0kb downstream 9531 true Scaffold133: 29012-38542 Capsella grandiflora
Cagra.0133s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 29012-34011 Capsella grandiflora
Cagra.0133s0009 10.0kb upstream 10.0kb upstream 14531 true Scaffold133: 34012-48542 Capsella grandiflora
Cagra.0133s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 38543-48542 Capsella grandiflora
Cagra.0133s0009 10.0kb downstream 10.0kb downstream 14531 true Scaffold133: 24012-38542 Capsella grandiflora
Cagra.0133s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 24012-34011 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374769 5261 Brassicaceae View MSA
123831662 5264 Brassicales-Malvales View MSA
124346407 5266 SBM View MSA
124242596 5268 Malvidae View MSA
124062417 5270 Rosid View MSA
123745190 5271 Pentapetalae View MSA
122793223 5272 Eudicot View MSA
122045433 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310448 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain