Gene : Cagra.0133s0005 C. grandiflora v1.1
Defline:  (1 of 1) 2.7.1.6//5.1.3.2 - UDP-glucose 4-epimerase / Uridine diphospho-galactose-4-epimerase Genomic Order:  5
Name:  ? Cagra.0133s0005 Secondary Identifier:  ? PAC:28899509
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3821 Capsella grandiflora pathologic  
Cgrandiflora PWY-6527 Capsella grandiflora pathologic  
Cgrandiflora PWY66-422 Capsella grandiflora pathologic  
Cgrandiflora PWY-7344 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0133s0005 0.5kb upstream 0.5kb upstream 3516 true Scaffold133: 20855-24370 Capsella grandiflora
Cagra.0133s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold133: 23871-24370 Capsella grandiflora
Cagra.0133s0005 0.5kb downstream 0.5kb downstream 3516 true Scaffold133: 20355-23870 Capsella grandiflora
Cagra.0133s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold133: 20355-20854 Capsella grandiflora
Cagra.0133s0005 1.0kb upstream 1.0kb upstream 4016 true Scaffold133: 20855-24870 Capsella grandiflora
Cagra.0133s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold133: 23871-24870 Capsella grandiflora
Cagra.0133s0005 1.0kb downstream 1.0kb downstream 4016 true Scaffold133: 19855-23870 Capsella grandiflora
Cagra.0133s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold133: 19855-20854 Capsella grandiflora
Cagra.0133s0005 2.0kb upstream 2.0kb upstream 5016 true Scaffold133: 20855-25870 Capsella grandiflora
Cagra.0133s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold133: 23871-25870 Capsella grandiflora
Cagra.0133s0005 2.0kb downstream 2.0kb downstream 5016 true Scaffold133: 18855-23870 Capsella grandiflora
Cagra.0133s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold133: 18855-20854 Capsella grandiflora
Cagra.0133s0005 5.0kb upstream 5.0kb upstream 8016 true Scaffold133: 20855-28870 Capsella grandiflora
Cagra.0133s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold133: 23871-28870 Capsella grandiflora
Cagra.0133s0005 5.0kb downstream 5.0kb downstream 8016 true Scaffold133: 15855-23870 Capsella grandiflora
Cagra.0133s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold133: 15855-20854 Capsella grandiflora
Cagra.0133s0005 10.0kb upstream 10.0kb upstream 13016 true Scaffold133: 20855-33870 Capsella grandiflora
Cagra.0133s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold133: 23871-33870 Capsella grandiflora
Cagra.0133s0005 10.0kb downstream 10.0kb downstream 13016 true Scaffold133: 10855-23870 Capsella grandiflora
Cagra.0133s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold133: 10855-20854 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364076 5261 Brassicaceae View MSA
123829397 5264 Brassicales-Malvales View MSA
124342034 5266 SBM View MSA
124248055 5268 Malvidae View MSA
124065862 5270 Rosid View MSA
123740112 5271 Pentapetalae View MSA
122791585 5272 Eudicot View MSA
122044418 5273 Angiosperm View MSA
121346867 5274 Embryophyte View MSA
123425103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain