Gene : Cagra.0096s0086 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23315:SF135 - ARMADILLO/BETA-CATENIN-LIKE REPEAT AND C2 CALCIUM/LIPID-BINDING DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  86
Name:  ? Cagra.0096s0086 Secondary Identifier:  ? PAC:28897018
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0096s0086 0.5kb upstream 0.5kb upstream 9147 true Scaffold96: 404630-413776 Capsella grandiflora
Cagra.0096s0086 0.5kb upstream 0.5kb upstream 500 false Scaffold96: 413277-413776 Capsella grandiflora
Cagra.0096s0086 0.5kb downstream 0.5kb downstream 9147 true Scaffold96: 404130-413276 Capsella grandiflora
Cagra.0096s0086 0.5kb downstream 0.5kb downstream 500 false Scaffold96: 404130-404629 Capsella grandiflora
Cagra.0096s0086 1.0kb upstream 1.0kb upstream 9647 true Scaffold96: 404630-414276 Capsella grandiflora
Cagra.0096s0086 1.0kb upstream 1.0kb upstream 1000 false Scaffold96: 413277-414276 Capsella grandiflora
Cagra.0096s0086 1.0kb downstream 1.0kb downstream 9647 true Scaffold96: 403630-413276 Capsella grandiflora
Cagra.0096s0086 1.0kb downstream 1.0kb downstream 1000 false Scaffold96: 403630-404629 Capsella grandiflora
Cagra.0096s0086 2.0kb upstream 2.0kb upstream 10647 true Scaffold96: 404630-415276 Capsella grandiflora
Cagra.0096s0086 2.0kb upstream 2.0kb upstream 2000 false Scaffold96: 413277-415276 Capsella grandiflora
Cagra.0096s0086 2.0kb downstream 2.0kb downstream 10647 true Scaffold96: 402630-413276 Capsella grandiflora
Cagra.0096s0086 2.0kb downstream 2.0kb downstream 2000 false Scaffold96: 402630-404629 Capsella grandiflora
Cagra.0096s0086 5.0kb upstream 5.0kb upstream 13647 true Scaffold96: 404630-418276 Capsella grandiflora
Cagra.0096s0086 5.0kb upstream 5.0kb upstream 5000 false Scaffold96: 413277-418276 Capsella grandiflora
Cagra.0096s0086 5.0kb downstream 5.0kb downstream 13647 true Scaffold96: 399630-413276 Capsella grandiflora
Cagra.0096s0086 5.0kb downstream 5.0kb downstream 5000 false Scaffold96: 399630-404629 Capsella grandiflora
Cagra.0096s0086 10.0kb upstream 10.0kb upstream 18647 true Scaffold96: 404630-423276 Capsella grandiflora
Cagra.0096s0086 10.0kb upstream 10.0kb upstream 10000 false Scaffold96: 413277-423276 Capsella grandiflora
Cagra.0096s0086 10.0kb downstream 10.0kb downstream 18647 true Scaffold96: 394630-413276 Capsella grandiflora
Cagra.0096s0086 10.0kb downstream 10.0kb downstream 10000 false Scaffold96: 394630-404629 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048106 5273 Angiosperm View MSA
122374581 5261 Brassicaceae View MSA
123836160 5264 Brassicales-Malvales View MSA
124342008 5266 SBM View MSA
124240457 5268 Malvidae View MSA
124062607 5270 Rosid View MSA
123740295 5271 Pentapetalae View MSA
122787406 5272 Eudicot View MSA
121347002 5274 Embryophyte View MSA
123380478 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain