Gene : Cagra.0104s0023 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10994:SF85 - RETICULON-LIKE PROTEIN B14-RELATED Genomic Order:  23
Name:  ? Cagra.0104s0023 Secondary Identifier:  ? PAC:28906188
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0104s0023 0.5kb upstream 0.5kb upstream 1780 true Scaffold104: 73042-74821 Capsella grandiflora
Cagra.0104s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold104: 74322-74821 Capsella grandiflora
Cagra.0104s0023 0.5kb downstream 0.5kb downstream 1780 true Scaffold104: 72542-74321 Capsella grandiflora
Cagra.0104s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold104: 72542-73041 Capsella grandiflora
Cagra.0104s0023 1.0kb upstream 1.0kb upstream 2280 true Scaffold104: 73042-75321 Capsella grandiflora
Cagra.0104s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold104: 74322-75321 Capsella grandiflora
Cagra.0104s0023 1.0kb downstream 1.0kb downstream 2280 true Scaffold104: 72042-74321 Capsella grandiflora
Cagra.0104s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold104: 72042-73041 Capsella grandiflora
Cagra.0104s0023 2.0kb upstream 2.0kb upstream 3280 true Scaffold104: 73042-76321 Capsella grandiflora
Cagra.0104s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold104: 74322-76321 Capsella grandiflora
Cagra.0104s0023 2.0kb downstream 2.0kb downstream 3280 true Scaffold104: 71042-74321 Capsella grandiflora
Cagra.0104s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold104: 71042-73041 Capsella grandiflora
Cagra.0104s0023 5.0kb upstream 5.0kb upstream 6280 true Scaffold104: 73042-79321 Capsella grandiflora
Cagra.0104s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold104: 74322-79321 Capsella grandiflora
Cagra.0104s0023 5.0kb downstream 5.0kb downstream 6280 true Scaffold104: 68042-74321 Capsella grandiflora
Cagra.0104s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold104: 68042-73041 Capsella grandiflora
Cagra.0104s0023 10.0kb upstream 10.0kb upstream 11280 true Scaffold104: 73042-84321 Capsella grandiflora
Cagra.0104s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold104: 74322-84321 Capsella grandiflora
Cagra.0104s0023 10.0kb downstream 10.0kb downstream 11280 true Scaffold104: 63042-74321 Capsella grandiflora
Cagra.0104s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold104: 63042-73041 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378611 5261 Brassicaceae View MSA
123834715 5264 Brassicales-Malvales View MSA
124351207 5266 SBM View MSA
124244747 5268 Malvidae View MSA
124065232 5270 Rosid View MSA
123744600 5271 Pentapetalae View MSA
122788689 5272 Eudicot View MSA
122048457 5273 Angiosperm View MSA
123429002 5275 Viridiplantae View MSA
121351639 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain