Gene : Cagra.0110s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22850:SF6 - GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1 Genomic Order:  4
Name:  ? Cagra.0110s0004 Secondary Identifier:  ? PAC:28919170
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0110s0004 0.5kb upstream 0.5kb upstream 3488 true Scaffold110: 9533-13020 Capsella grandiflora
Cagra.0110s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold110: 12521-13020 Capsella grandiflora
Cagra.0110s0004 0.5kb downstream 0.5kb downstream 3488 true Scaffold110: 9033-12520 Capsella grandiflora
Cagra.0110s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold110: 9033-9532 Capsella grandiflora
Cagra.0110s0004 1.0kb upstream 1.0kb upstream 3988 true Scaffold110: 9533-13520 Capsella grandiflora
Cagra.0110s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold110: 12521-13520 Capsella grandiflora
Cagra.0110s0004 1.0kb downstream 1.0kb downstream 3988 true Scaffold110: 8533-12520 Capsella grandiflora
Cagra.0110s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold110: 8533-9532 Capsella grandiflora
Cagra.0110s0004 2.0kb upstream 2.0kb upstream 4988 true Scaffold110: 9533-14520 Capsella grandiflora
Cagra.0110s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold110: 12521-14520 Capsella grandiflora
Cagra.0110s0004 2.0kb downstream 2.0kb downstream 4988 true Scaffold110: 7533-12520 Capsella grandiflora
Cagra.0110s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold110: 7533-9532 Capsella grandiflora
Cagra.0110s0004 5.0kb upstream 5.0kb upstream 7988 true Scaffold110: 9533-17520 Capsella grandiflora
Cagra.0110s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold110: 12521-17520 Capsella grandiflora
Cagra.0110s0004 5.0kb downstream 5.0kb downstream 7988 true Scaffold110: 4533-12520 Capsella grandiflora
Cagra.0110s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold110: 4533-9532 Capsella grandiflora
Cagra.0110s0004 10.0kb upstream 10.0kb upstream 12988 true Scaffold110: 9533-22520 Capsella grandiflora
Cagra.0110s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold110: 12521-22520 Capsella grandiflora
Cagra.0110s0004 10.0kb downstream 10.0kb downstream 12520 true Scaffold110: 1-12520 Capsella grandiflora
Cagra.0110s0004 10.0kb downstream 10.0kb downstream 9532 false Scaffold110: 1-9532 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378757 5261 Brassicaceae View MSA
123836967 5264 Brassicales-Malvales View MSA
124346936 5266 SBM View MSA
124246301 5268 Malvidae View MSA
124069460 5270 Rosid View MSA
123741946 5271 Pentapetalae View MSA
122794414 5272 Eudicot View MSA
122048731 5273 Angiosperm View MSA
121348301 5274 Embryophyte View MSA
123425749 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain