Gene : Cagra.0104s0027 C. grandiflora v1.1
Defline:  (1 of 9) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  27
Name:  ? Cagra.0104s0027 Secondary Identifier:  ? PAC:28906213
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0104s0027 0.5kb upstream 0.5kb upstream 1928 true Scaffold104: 95479-97406 Capsella grandiflora
Cagra.0104s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold104: 95479-95978 Capsella grandiflora
Cagra.0104s0027 0.5kb downstream 0.5kb downstream 1928 true Scaffold104: 95979-97906 Capsella grandiflora
Cagra.0104s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold104: 97407-97906 Capsella grandiflora
Cagra.0104s0027 1.0kb upstream 1.0kb upstream 2428 true Scaffold104: 94979-97406 Capsella grandiflora
Cagra.0104s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold104: 94979-95978 Capsella grandiflora
Cagra.0104s0027 1.0kb downstream 1.0kb downstream 2428 true Scaffold104: 95979-98406 Capsella grandiflora
Cagra.0104s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold104: 97407-98406 Capsella grandiflora
Cagra.0104s0027 2.0kb upstream 2.0kb upstream 3428 true Scaffold104: 93979-97406 Capsella grandiflora
Cagra.0104s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold104: 93979-95978 Capsella grandiflora
Cagra.0104s0027 2.0kb downstream 2.0kb downstream 3428 true Scaffold104: 95979-99406 Capsella grandiflora
Cagra.0104s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold104: 97407-99406 Capsella grandiflora
Cagra.0104s0027 5.0kb upstream 5.0kb upstream 6428 true Scaffold104: 90979-97406 Capsella grandiflora
Cagra.0104s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold104: 90979-95978 Capsella grandiflora
Cagra.0104s0027 5.0kb downstream 5.0kb downstream 6428 true Scaffold104: 95979-102406 Capsella grandiflora
Cagra.0104s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold104: 97407-102406 Capsella grandiflora
Cagra.0104s0027 10.0kb upstream 10.0kb upstream 11428 true Scaffold104: 85979-97406 Capsella grandiflora
Cagra.0104s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold104: 85979-95978 Capsella grandiflora
Cagra.0104s0027 10.0kb downstream 10.0kb downstream 8214 true Scaffold104: 95979-104192 Capsella grandiflora
Cagra.0104s0027 10.0kb downstream 10.0kb downstream 6786 false Scaffold104: 97407-104192 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380856 5261 Brassicaceae View MSA
123802936 5264 Brassicales-Malvales View MSA
124300086 5266 SBM View MSA
124253644 5268 Malvidae View MSA
124073267 5270 Rosid View MSA
123753733 5271 Pentapetalae View MSA
122792020 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain