Gene : Cagra.0104s0028 C. grandiflora v1.1
Genomic Order:  28 Name:  ? Cagra.0104s0028
Secondary Identifier:  ? PAC:28906182
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0104s0028 0.5kb upstream 0.5kb upstream 2198 true Scaffold104: 97032-99229 Capsella grandiflora
Cagra.0104s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold104: 97032-97531 Capsella grandiflora
Cagra.0104s0028 0.5kb downstream 0.5kb downstream 2198 true Scaffold104: 97532-99729 Capsella grandiflora
Cagra.0104s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold104: 99230-99729 Capsella grandiflora
Cagra.0104s0028 1.0kb upstream 1.0kb upstream 2698 true Scaffold104: 96532-99229 Capsella grandiflora
Cagra.0104s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold104: 96532-97531 Capsella grandiflora
Cagra.0104s0028 1.0kb downstream 1.0kb downstream 2698 true Scaffold104: 97532-100229 Capsella grandiflora
Cagra.0104s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold104: 99230-100229 Capsella grandiflora
Cagra.0104s0028 2.0kb upstream 2.0kb upstream 3698 true Scaffold104: 95532-99229 Capsella grandiflora
Cagra.0104s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold104: 95532-97531 Capsella grandiflora
Cagra.0104s0028 2.0kb downstream 2.0kb downstream 3698 true Scaffold104: 97532-101229 Capsella grandiflora
Cagra.0104s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold104: 99230-101229 Capsella grandiflora
Cagra.0104s0028 5.0kb upstream 5.0kb upstream 6698 true Scaffold104: 92532-99229 Capsella grandiflora
Cagra.0104s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold104: 92532-97531 Capsella grandiflora
Cagra.0104s0028 5.0kb downstream 5.0kb downstream 6661 true Scaffold104: 97532-104192 Capsella grandiflora
Cagra.0104s0028 5.0kb downstream 5.0kb downstream 4963 false Scaffold104: 99230-104192 Capsella grandiflora
Cagra.0104s0028 10.0kb upstream 10.0kb upstream 11698 true Scaffold104: 87532-99229 Capsella grandiflora
Cagra.0104s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold104: 87532-97531 Capsella grandiflora
Cagra.0104s0028 10.0kb downstream 10.0kb downstream 6661 true Scaffold104: 97532-104192 Capsella grandiflora
Cagra.0104s0028 10.0kb downstream 10.0kb downstream 4963 false Scaffold104: 99230-104192 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838630 5264 Brassicales-Malvales View MSA
122373151 5261 Brassicaceae View MSA
124344824 5266 SBM View MSA
124244800 5268 Malvidae View MSA
124064398 5270 Rosid View MSA
123746732 5271 Pentapetalae View MSA
122786820 5272 Eudicot View MSA
122047207 5273 Angiosperm View MSA
121310707 5274 Embryophyte View MSA
123348126 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain