Gene : Cagra.0110s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22942:SF1 - MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG Genomic Order:  8
Name:  ? Cagra.0110s0008 Secondary Identifier:  ? PAC:28919165
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0110s0008 0.5kb upstream 0.5kb upstream 3341 true Scaffold110: 28688-32028 Capsella grandiflora
Cagra.0110s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold110: 31529-32028 Capsella grandiflora
Cagra.0110s0008 0.5kb downstream 0.5kb downstream 3341 true Scaffold110: 28188-31528 Capsella grandiflora
Cagra.0110s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold110: 28188-28687 Capsella grandiflora
Cagra.0110s0008 1.0kb upstream 1.0kb upstream 3841 true Scaffold110: 28688-32528 Capsella grandiflora
Cagra.0110s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold110: 31529-32528 Capsella grandiflora
Cagra.0110s0008 1.0kb downstream 1.0kb downstream 3841 true Scaffold110: 27688-31528 Capsella grandiflora
Cagra.0110s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold110: 27688-28687 Capsella grandiflora
Cagra.0110s0008 2.0kb upstream 2.0kb upstream 4841 true Scaffold110: 28688-33528 Capsella grandiflora
Cagra.0110s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold110: 31529-33528 Capsella grandiflora
Cagra.0110s0008 2.0kb downstream 2.0kb downstream 4841 true Scaffold110: 26688-31528 Capsella grandiflora
Cagra.0110s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold110: 26688-28687 Capsella grandiflora
Cagra.0110s0008 5.0kb upstream 5.0kb upstream 7841 true Scaffold110: 28688-36528 Capsella grandiflora
Cagra.0110s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold110: 31529-36528 Capsella grandiflora
Cagra.0110s0008 5.0kb downstream 5.0kb downstream 7841 true Scaffold110: 23688-31528 Capsella grandiflora
Cagra.0110s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold110: 23688-28687 Capsella grandiflora
Cagra.0110s0008 10.0kb upstream 10.0kb upstream 12841 true Scaffold110: 28688-41528 Capsella grandiflora
Cagra.0110s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold110: 31529-41528 Capsella grandiflora
Cagra.0110s0008 10.0kb downstream 10.0kb downstream 12841 true Scaffold110: 18688-31528 Capsella grandiflora
Cagra.0110s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold110: 18688-28687 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365461 5261 Brassicaceae View MSA
123828812 5264 Brassicales-Malvales View MSA
124344944 5266 SBM View MSA
124242128 5268 Malvidae View MSA
124060910 5270 Rosid View MSA
123743404 5271 Pentapetalae View MSA
122790818 5272 Eudicot View MSA
122045748 5273 Angiosperm View MSA
121351318 5274 Embryophyte View MSA
123382118 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain