Gene : Cagra.0110s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22850:SF85 - WD-40 REPEAT-CONTAINING PROTEIN MSI4-RELATED Genomic Order:  6
Name:  ? Cagra.0110s0006 Secondary Identifier:  ? PAC:28919159
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0110s0006 0.5kb upstream 0.5kb upstream 4282 true Scaffold110: 14779-19060 Capsella grandiflora
Cagra.0110s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold110: 18561-19060 Capsella grandiflora
Cagra.0110s0006 0.5kb downstream 0.5kb downstream 4282 true Scaffold110: 14279-18560 Capsella grandiflora
Cagra.0110s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold110: 14279-14778 Capsella grandiflora
Cagra.0110s0006 1.0kb upstream 1.0kb upstream 4782 true Scaffold110: 14779-19560 Capsella grandiflora
Cagra.0110s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold110: 18561-19560 Capsella grandiflora
Cagra.0110s0006 1.0kb downstream 1.0kb downstream 4782 true Scaffold110: 13779-18560 Capsella grandiflora
Cagra.0110s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold110: 13779-14778 Capsella grandiflora
Cagra.0110s0006 2.0kb upstream 2.0kb upstream 5782 true Scaffold110: 14779-20560 Capsella grandiflora
Cagra.0110s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold110: 18561-20560 Capsella grandiflora
Cagra.0110s0006 2.0kb downstream 2.0kb downstream 5782 true Scaffold110: 12779-18560 Capsella grandiflora
Cagra.0110s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold110: 12779-14778 Capsella grandiflora
Cagra.0110s0006 5.0kb upstream 5.0kb upstream 8782 true Scaffold110: 14779-23560 Capsella grandiflora
Cagra.0110s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold110: 18561-23560 Capsella grandiflora
Cagra.0110s0006 5.0kb downstream 5.0kb downstream 8782 true Scaffold110: 9779-18560 Capsella grandiflora
Cagra.0110s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold110: 9779-14778 Capsella grandiflora
Cagra.0110s0006 10.0kb upstream 10.0kb upstream 13782 true Scaffold110: 14779-28560 Capsella grandiflora
Cagra.0110s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold110: 18561-28560 Capsella grandiflora
Cagra.0110s0006 10.0kb downstream 10.0kb downstream 13782 true Scaffold110: 4779-18560 Capsella grandiflora
Cagra.0110s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold110: 4779-14778 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041058 5273 Angiosperm View MSA
122378775 5261 Brassicaceae View MSA
123828163 5264 Brassicales-Malvales View MSA
124341590 5266 SBM View MSA
124237809 5268 Malvidae View MSA
124070712 5270 Rosid View MSA
123743573 5271 Pentapetalae View MSA
122790330 5272 Eudicot View MSA
121347488 5274 Embryophyte View MSA
123428491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain