Gene : Cagra.0114s0011 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12832:SF11 - PROTEIN M05D6.2 Genomic Order:  11
Name:  ? Cagra.0114s0011 Secondary Identifier:  ? PAC:28915760
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0114s0011 0.5kb upstream 0.5kb upstream 4812 true Scaffold114: 35701-40512 Capsella grandiflora
Cagra.0114s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold114: 40013-40512 Capsella grandiflora
Cagra.0114s0011 0.5kb downstream 0.5kb downstream 4812 true Scaffold114: 35201-40012 Capsella grandiflora
Cagra.0114s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold114: 35201-35700 Capsella grandiflora
Cagra.0114s0011 1.0kb upstream 1.0kb upstream 5312 true Scaffold114: 35701-41012 Capsella grandiflora
Cagra.0114s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold114: 40013-41012 Capsella grandiflora
Cagra.0114s0011 1.0kb downstream 1.0kb downstream 5312 true Scaffold114: 34701-40012 Capsella grandiflora
Cagra.0114s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold114: 34701-35700 Capsella grandiflora
Cagra.0114s0011 2.0kb upstream 2.0kb upstream 6312 true Scaffold114: 35701-42012 Capsella grandiflora
Cagra.0114s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold114: 40013-42012 Capsella grandiflora
Cagra.0114s0011 2.0kb downstream 2.0kb downstream 6312 true Scaffold114: 33701-40012 Capsella grandiflora
Cagra.0114s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold114: 33701-35700 Capsella grandiflora
Cagra.0114s0011 5.0kb upstream 5.0kb upstream 9312 true Scaffold114: 35701-45012 Capsella grandiflora
Cagra.0114s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold114: 40013-45012 Capsella grandiflora
Cagra.0114s0011 5.0kb downstream 5.0kb downstream 9312 true Scaffold114: 30701-40012 Capsella grandiflora
Cagra.0114s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold114: 30701-35700 Capsella grandiflora
Cagra.0114s0011 10.0kb upstream 10.0kb upstream 14312 true Scaffold114: 35701-50012 Capsella grandiflora
Cagra.0114s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold114: 40013-50012 Capsella grandiflora
Cagra.0114s0011 10.0kb downstream 10.0kb downstream 14312 true Scaffold114: 25701-40012 Capsella grandiflora
Cagra.0114s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold114: 25701-35700 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373815 5261 Brassicaceae View MSA
123836095 5264 Brassicales-Malvales View MSA
124346419 5266 SBM View MSA
124240744 5268 Malvidae View MSA
124065811 5270 Rosid View MSA
123746081 5271 Pentapetalae View MSA
122792060 5272 Eudicot View MSA
122043242 5273 Angiosperm View MSA
121345323 5274 Embryophyte View MSA
123426758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain